Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Cks1brtQ3UNC9 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cks1brtQ3UNC9 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cks1brtQ3UNC9 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC12.71□□□□□ -0.37
Cks1brtQ3UNC9 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cks1brtQ3UNC9 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cks1brtQ3UNC9 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.37
Cks1brtQ3UNC9 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Cks1brtQ3UNC9 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Cks1brtQ3UNC9 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cks1brtQ3UNC9 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Cks1brtQ3UNC9 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cks1brtQ3UNC9 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC12.71□□□□□ -0.37
Cks1brtQ3UNC9 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cks1brtQ3UNC9 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Cks1brtQ3UNC9 Gm9870-201ENSMUST00000063874 645 ntBASIC12.71□□□□□ -0.37
Cks1brtQ3UNC9 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Cks1brtQ3UNC9 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cks1brtQ3UNC9 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cks1brtQ3UNC9 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cks1brtQ3UNC9 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cks1brtQ3UNC9 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cks1brtQ3UNC9 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cks1brtQ3UNC9 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cks1brtQ3UNC9 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cks1brtQ3UNC9 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cks1brtQ3UNC9 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.38
Cks1brtQ3UNC9 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cks1brtQ3UNC9 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cks1brtQ3UNC9 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cks1brtQ3UNC9 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cks1brtQ3UNC9 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cks1brtQ3UNC9 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Cks1brtQ3UNC9 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cks1brtQ3UNC9 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cks1brtQ3UNC9 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cks1brtQ3UNC9 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cks1brtQ3UNC9 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cks1brtQ3UNC9 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Cks1brtQ3UNC9 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cks1brtQ3UNC9 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cks1brtQ3UNC9 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cks1brtQ3UNC9 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cks1brtQ3UNC9 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cks1brtQ3UNC9 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cks1brtQ3UNC9 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cks1brtQ3UNC9 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cks1brtQ3UNC9 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cks1brtQ3UNC9 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cks1brtQ3UNC9 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cks1brtQ3UNC9 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cks1brtQ3UNC9 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cks1brtQ3UNC9 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cks1brtQ3UNC9 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cks1brtQ3UNC9 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cks1brtQ3UNC9 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cks1brtQ3UNC9 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cks1brtQ3UNC9 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cks1brtQ3UNC9 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cks1brtQ3UNC9 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cks1brtQ3UNC9 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cks1brtQ3UNC9 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Cks1brtQ3UNC9 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cks1brtQ3UNC9 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC12.69□□□□□ -0.38
Cks1brtQ3UNC9 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC12.69□□□□□ -0.38
Cks1brtQ3UNC9 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cks1brtQ3UNC9 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC12.69□□□□□ -0.38
Cks1brtQ3UNC9 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC12.69□□□□□ -0.38
Cks1brtQ3UNC9 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC12.69□□□□□ -0.38
Cks1brtQ3UNC9 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cks1brtQ3UNC9 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cks1brtQ3UNC9 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cks1brtQ3UNC9 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cks1brtQ3UNC9 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cks1brtQ3UNC9 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cks1brtQ3UNC9 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cks1brtQ3UNC9 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cks1brtQ3UNC9 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cks1brtQ3UNC9 Haglr-201ENSMUST00000100000 2085 ntBASIC12.68□□□□□ -0.38
Cks1brtQ3UNC9 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cks1brtQ3UNC9 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cks1brtQ3UNC9 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cks1brtQ3UNC9 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC12.68□□□□□ -0.38
Cks1brtQ3UNC9 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cks1brtQ3UNC9 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cks1brtQ3UNC9 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cks1brtQ3UNC9 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cks1brtQ3UNC9 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cks1brtQ3UNC9 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cks1brtQ3UNC9 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cks1brtQ3UNC9 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cks1brtQ3UNC9 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cks1brtQ3UNC9 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cks1brtQ3UNC9 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cks1brtQ3UNC9 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cks1brtQ3UNC9 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC12.68□□□□□ -0.38
Cks1brtQ3UNC9 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC12.68□□□□□ -0.38
Cks1brtQ3UNC9 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC12.68□□□□□ -0.38
Cks1brtQ3UNC9 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cks1brtQ3UNC9 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms