Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Timp3P39876 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC14.34□□□□□ -0.11
Timp3P39876 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC14.34□□□□□ -0.11
Timp3P39876 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC14.34□□□□□ -0.11
Timp3P39876 AC158538.1-201ENSMUST00000225870 294 ntBASIC14.34□□□□□ -0.11
Timp3P39876 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Timp3P39876 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Timp3P39876 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Timp3P39876 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Timp3P39876 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Timp3P39876 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Timp3P39876 Gm43213-201ENSMUST00000151866 1790 ntBASIC14.34□□□□□ -0.11
Timp3P39876 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Timp3P39876 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Timp3P39876 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Timp3P39876 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Timp3P39876 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Timp3P39876 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Timp3P39876 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Timp3P39876 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Timp3P39876 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Timp3P39876 Gm13836-201ENSMUST00000121159 501 ntBASIC14.33□□□□□ -0.12
Timp3P39876 Gm18025-201ENSMUST00000221733 862 ntBASIC14.33□□□□□ -0.12
Timp3P39876 AC175538.1-201ENSMUST00000225343 1269 ntBASIC14.33□□□□□ -0.12
Timp3P39876 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Timp3P39876 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Timp3P39876 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Timp3P39876 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Timp3P39876 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Timp3P39876 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Timp3P39876 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Timp3P39876 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Timp3P39876 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Timp3P39876 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Timp3P39876 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Timp3P39876 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Timp3P39876 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Timp3P39876 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Timp3P39876 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Timp3P39876 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Timp3P39876 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC14.32□□□□□ -0.12
Timp3P39876 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC14.32□□□□□ -0.12
Timp3P39876 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Timp3P39876 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Timp3P39876 Mir5122-201ENSMUST00000175004 89 ntBASIC14.32□□□□□ -0.12
Timp3P39876 Gm43183-201ENSMUST00000200632 547 ntBASIC14.32□□□□□ -0.12
Timp3P39876 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Timp3P39876 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Timp3P39876 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Timp3P39876 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Timp3P39876 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC14.32□□□□□ -0.12
Timp3P39876 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Timp3P39876 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Timp3P39876 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Timp3P39876 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Timp3P39876 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Timp3P39876 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Timp3P39876 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Timp3P39876 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Timp3P39876 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Timp3P39876 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Timp3P39876 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Timp3P39876 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Timp3P39876 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC14.31□□□□□ -0.12
Timp3P39876 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Timp3P39876 Gm45560-201ENSMUST00000211492 1472 ntBASIC14.31□□□□□ -0.12
Timp3P39876 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Timp3P39876 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Timp3P39876 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Timp3P39876 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC14.31□□□□□ -0.12
Timp3P39876 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
Timp3P39876 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Timp3P39876 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC14.31□□□□□ -0.12
Timp3P39876 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Timp3P39876 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Timp3P39876 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Timp3P39876 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Timp3P39876 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.31□□□□□ -0.12
Timp3P39876 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Timp3P39876 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Timp3P39876 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Timp3P39876 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Timp3P39876 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Timp3P39876 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Timp3P39876 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Timp3P39876 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Timp3P39876 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Timp3P39876 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC14.3□□□□□ -0.12
Timp3P39876 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Timp3P39876 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Timp3P39876 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Timp3P39876 Gm5828-201ENSMUST00000071842 1860 ntBASIC14.3□□□□□ -0.12
Timp3P39876 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Timp3P39876 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC14.3□□□□□ -0.12
Timp3P39876 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Timp3P39876 Krtap5-1-202ENSMUST00000188274 742 ntBASIC14.3□□□□□ -0.12
Timp3P39876 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC14.3□□□□□ -0.12
Timp3P39876 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Timp3P39876 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Timp3P39876 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms