Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Idnk-204ENSMUST00000226010 1898 ntBASIC16.28■□□□□ 0.2
Nedd8P29595 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nedd8P29595 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nedd8P29595 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nedd8P29595 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Nedd8P29595 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nedd8P29595 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.28■□□□□ 0.2
Nedd8P29595 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nedd8P29595 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nedd8P29595 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nedd8P29595 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nedd8P29595 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nedd8P29595 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nedd8P29595 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nedd8P29595 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nedd8P29595 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nedd8P29595 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC16.27■□□□□ 0.2
Nedd8P29595 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nedd8P29595 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nedd8P29595 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nedd8P29595 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nedd8P29595 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Nedd8P29595 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Nedd8P29595 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Nedd8P29595 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Nedd8P29595 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Nedd8P29595 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Nedd8P29595 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Nedd8P29595 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Nedd8P29595 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Nedd8P29595 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Nedd8P29595 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Nedd8P29595 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Nedd8P29595 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Nedd8P29595 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Nedd8P29595 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Nedd8P29595 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Nedd8P29595 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nedd8P29595 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nedd8P29595 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nedd8P29595 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Nedd8P29595 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Nedd8P29595 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nedd8P29595 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nedd8P29595 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.26■□□□□ 0.19
Nedd8P29595 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nedd8P29595 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nedd8P29595 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC16.26■□□□□ 0.19
Nedd8P29595 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Nedd8P29595 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC16.26■□□□□ 0.19
Nedd8P29595 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nedd8P29595 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nedd8P29595 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nedd8P29595 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nedd8P29595 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nedd8P29595 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nedd8P29595 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Nedd8P29595 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nedd8P29595 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Nedd8P29595 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Nedd8P29595 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nedd8P29595 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nedd8P29595 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Nedd8P29595 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nedd8P29595 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Nedd8P29595 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Nedd8P29595 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nedd8P29595 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nedd8P29595 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nedd8P29595 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Nedd8P29595 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nedd8P29595 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nedd8P29595 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Nedd8P29595 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Nedd8P29595 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Nedd8P29595 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Nedd8P29595 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Nedd8P29595 Gm19094-201ENSMUST00000209791 1246 ntBASIC16.25■□□□□ 0.19
Nedd8P29595 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.25■□□□□ 0.19
Nedd8P29595 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nedd8P29595 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nedd8P29595 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Nedd8P29595 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nedd8P29595 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nedd8P29595 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Nedd8P29595 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.24■□□□□ 0.19
Nedd8P29595 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.24■□□□□ 0.19
Nedd8P29595 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nedd8P29595 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nedd8P29595 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nedd8P29595 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nedd8P29595 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nedd8P29595 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nedd8P29595 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Nedd8P29595 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nedd8P29595 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Nedd8P29595 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.24■□□□□ 0.19
Nedd8P29595 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nedd8P29595 CT030146.1-201ENSMUST00000220919 217 ntBASIC16.24■□□□□ 0.19
Nedd8P29595 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms