Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cldn1O88551 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Cldn1O88551 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Cldn1O88551 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cldn1O88551 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Cldn1O88551 Gm10654-201ENSMUST00000098653 1633 ntBASIC15□□□□□ -0.01
Cldn1O88551 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Cldn1O88551 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cldn1O88551 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC15□□□□□ -0.01
Cldn1O88551 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cldn1O88551 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Cldn1O88551 Gm2274-201ENSMUST00000184539 609 ntBASIC15□□□□□ -0.01
Cldn1O88551 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
Cldn1O88551 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cldn1O88551 AC134329.2-201ENSMUST00000217897 428 ntBASIC15□□□□□ -0.01
Cldn1O88551 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cldn1O88551 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cldn1O88551 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cldn1O88551 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cldn1O88551 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cldn1O88551 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cldn1O88551 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cldn1O88551 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cldn1O88551 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cldn1O88551 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cldn1O88551 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cldn1O88551 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cldn1O88551 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cldn1O88551 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cldn1O88551 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC14.99□□□□□ -0.01
Cldn1O88551 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC14.99□□□□□ -0.01
Cldn1O88551 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC14.99□□□□□ -0.01
Cldn1O88551 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cldn1O88551 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cldn1O88551 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cldn1O88551 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Cldn1O88551 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cldn1O88551 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cldn1O88551 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cldn1O88551 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cldn1O88551 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cldn1O88551 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cldn1O88551 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cldn1O88551 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cldn1O88551 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cldn1O88551 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cldn1O88551 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cldn1O88551 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Cldn1O88551 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cldn1O88551 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cldn1O88551 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Cldn1O88551 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cldn1O88551 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cldn1O88551 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC14.98□□□□□ -0.01
Cldn1O88551 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cldn1O88551 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Cldn1O88551 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cldn1O88551 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cldn1O88551 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC14.98□□□□□ -0.01
Cldn1O88551 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cldn1O88551 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cldn1O88551 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC14.97□□□□□ -0.01
Cldn1O88551 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cldn1O88551 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Cldn1O88551 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cldn1O88551 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cldn1O88551 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cldn1O88551 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cldn1O88551 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cldn1O88551 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC14.97□□□□□ -0.01
Cldn1O88551 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cldn1O88551 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.97□□□□□ -0.01
Cldn1O88551 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cldn1O88551 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cldn1O88551 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Cldn1O88551 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cldn1O88551 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cldn1O88551 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
Cldn1O88551 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cldn1O88551 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cldn1O88551 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cldn1O88551 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cldn1O88551 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cldn1O88551 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cldn1O88551 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cldn1O88551 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC14.96□□□□□ -0.01
Cldn1O88551 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cldn1O88551 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cldn1O88551 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cldn1O88551 Gm25016-201ENSMUST00000158399 131 ntBASIC14.96□□□□□ -0.01
Cldn1O88551 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Cldn1O88551 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cldn1O88551 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cldn1O88551 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cldn1O88551 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
Cldn1O88551 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Cldn1O88551 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Cldn1O88551 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Cldn1O88551 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cldn1O88551 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms