Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trove2O08848 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trove2O08848 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trove2O08848 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Trove2O08848 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trove2O08848 Tgds-204ENSMUST00000228543 1594 ntBASIC18■□□□□ 0.47
Trove2O08848 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.99■□□□□ 0.47
Trove2O08848 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trove2O08848 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trove2O08848 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Trove2O08848 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trove2O08848 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trove2O08848 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trove2O08848 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trove2O08848 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trove2O08848 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trove2O08848 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Trove2O08848 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trove2O08848 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Trove2O08848 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trove2O08848 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trove2O08848 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trove2O08848 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Trove2O08848 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trove2O08848 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trove2O08848 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trove2O08848 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trove2O08848 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trove2O08848 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trove2O08848 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trove2O08848 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trove2O08848 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Trove2O08848 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.98■□□□□ 0.47
Trove2O08848 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.98■□□□□ 0.47
Trove2O08848 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trove2O08848 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.98■□□□□ 0.47
Trove2O08848 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Trove2O08848 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trove2O08848 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.98■□□□□ 0.47
Trove2O08848 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trove2O08848 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trove2O08848 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Trove2O08848 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trove2O08848 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Trove2O08848 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trove2O08848 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trove2O08848 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.97■□□□□ 0.47
Trove2O08848 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Trove2O08848 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trove2O08848 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
Trove2O08848 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trove2O08848 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.97■□□□□ 0.47
Trove2O08848 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
Trove2O08848 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.97■□□□□ 0.47
Trove2O08848 Gm7514-201ENSMUST00000209475 934 ntBASIC17.97■□□□□ 0.47
Trove2O08848 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trove2O08848 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trove2O08848 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trove2O08848 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trove2O08848 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trove2O08848 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trove2O08848 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC17.96■□□□□ 0.47
Trove2O08848 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trove2O08848 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trove2O08848 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trove2O08848 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trove2O08848 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trove2O08848 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
Trove2O08848 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trove2O08848 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.96■□□□□ 0.47
Trove2O08848 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trove2O08848 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trove2O08848 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trove2O08848 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Trove2O08848 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trove2O08848 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trove2O08848 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
Trove2O08848 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trove2O08848 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trove2O08848 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trove2O08848 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trove2O08848 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trove2O08848 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.95■□□□□ 0.46
Trove2O08848 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
Trove2O08848 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trove2O08848 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trove2O08848 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trove2O08848 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trove2O08848 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trove2O08848 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.94■□□□□ 0.46
Trove2O08848 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Trove2O08848 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.94■□□□□ 0.46
Trove2O08848 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.94■□□□□ 0.46
Trove2O08848 AV356131-201ENSMUST00000206201 750 ntBASIC17.94■□□□□ 0.46
Trove2O08848 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.94■□□□□ 0.46
Trove2O08848 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trove2O08848 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trove2O08848 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trove2O08848 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
Trove2O08848 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms