Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh1F7BJK1 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh1F7BJK1 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh1F7BJK1 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh1F7BJK1 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh1F7BJK1 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh1F7BJK1 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh1F7BJK1 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC15.81■□□□□ 0.12
Pcdh1F7BJK1 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh1F7BJK1 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC15.81■□□□□ 0.12
Pcdh1F7BJK1 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh1F7BJK1 Ap3s1-204ENSMUST00000225520 957 ntBASIC15.81■□□□□ 0.12
Pcdh1F7BJK1 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh1F7BJK1 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Pcdh1F7BJK1 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC15.81■□□□□ 0.12
Pcdh1F7BJK1 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh1F7BJK1 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh1F7BJK1 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh1F7BJK1 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.8■□□□□ 0.12
Pcdh1F7BJK1 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh1F7BJK1 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC15.8■□□□□ 0.12
Pcdh1F7BJK1 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh1F7BJK1 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh1F7BJK1 Gm45774-201ENSMUST00000211992 2665 ntBASIC15.8■□□□□ 0.12
Pcdh1F7BJK1 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh1F7BJK1 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Pcdh1F7BJK1 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Pcdh1F7BJK1 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC15.8■□□□□ 0.12
Pcdh1F7BJK1 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC15.8■□□□□ 0.12
Pcdh1F7BJK1 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh1F7BJK1 Mir8112-201ENSMUST00000184382 131 ntBASIC15.8■□□□□ 0.12
Pcdh1F7BJK1 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC15.8■□□□□ 0.12
Pcdh1F7BJK1 Gm18671-201ENSMUST00000214826 683 ntBASIC15.8■□□□□ 0.12
Pcdh1F7BJK1 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC15.8■□□□□ 0.12
Pcdh1F7BJK1 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh1F7BJK1 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.8■□□□□ 0.12
Pcdh1F7BJK1 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh1F7BJK1 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh1F7BJK1 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh1F7BJK1 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh1F7BJK1 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.79■□□□□ 0.12
Pcdh1F7BJK1 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh1F7BJK1 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Pcdh1F7BJK1 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh1F7BJK1 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Pcdh1F7BJK1 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Pcdh1F7BJK1 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh1F7BJK1 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh1F7BJK1 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh1F7BJK1 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh1F7BJK1 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh1F7BJK1 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh1F7BJK1 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh1F7BJK1 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Pcdh1F7BJK1 AC125311.2-201ENSMUST00000227477 1940 ntBASIC15.78■□□□□ 0.12
Pcdh1F7BJK1 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Pcdh1F7BJK1 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh1F7BJK1 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
Pcdh1F7BJK1 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh1F7BJK1 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC15.78■□□□□ 0.12
Pcdh1F7BJK1 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC15.78■□□□□ 0.12
Pcdh1F7BJK1 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Pcdh1F7BJK1 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh1F7BJK1 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Pcdh1F7BJK1 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh1F7BJK1 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh1F7BJK1 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh1F7BJK1 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh1F7BJK1 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh1F7BJK1 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC15.78■□□□□ 0.12
Pcdh1F7BJK1 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Pcdh1F7BJK1 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdh1F7BJK1 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdh1F7BJK1 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdh1F7BJK1 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdh1F7BJK1 Gm28265-201ENSMUST00000188201 2319 ntBASIC15.77■□□□□ 0.12
Pcdh1F7BJK1 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdh1F7BJK1 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdh1F7BJK1 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdh1F7BJK1 Gm18284-201ENSMUST00000172604 624 ntBASIC15.77■□□□□ 0.12
Pcdh1F7BJK1 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdh1F7BJK1 Gm42642-201ENSMUST00000200683 355 ntBASIC15.77■□□□□ 0.12
Pcdh1F7BJK1 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdh1F7BJK1 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdh1F7BJK1 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Pcdh1F7BJK1 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdh1F7BJK1 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.11
Pcdh1F7BJK1 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Pcdh1F7BJK1 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh1F7BJK1 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh1F7BJK1 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh1F7BJK1 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh1F7BJK1 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh1F7BJK1 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh1F7BJK1 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh1F7BJK1 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh1F7BJK1 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Pcdh1F7BJK1 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC15.76■□□□□ 0.11
Pcdh1F7BJK1 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
Pcdh1F7BJK1 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms