Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav4-4-dv10A0A075B651 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trav4-4-dv10A0A075B651 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC13.7□□□□□ -0.22
Trav4-4-dv10A0A075B651 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav4-4-dv10A0A075B651 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav4-4-dv10A0A075B651 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav4-4-dv10A0A075B651 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav4-4-dv10A0A075B651 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav4-4-dv10A0A075B651 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav4-4-dv10A0A075B651 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav4-4-dv10A0A075B651 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trav4-4-dv10A0A075B651 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Trav4-4-dv10A0A075B651 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trav4-4-dv10A0A075B651 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Trav4-4-dv10A0A075B651 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav4-4-dv10A0A075B651 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav4-4-dv10A0A075B651 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Trav4-4-dv10A0A075B651 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav4-4-dv10A0A075B651 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
Trav4-4-dv10A0A075B651 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav4-4-dv10A0A075B651 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav4-4-dv10A0A075B651 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav4-4-dv10A0A075B651 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav4-4-dv10A0A075B651 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav4-4-dv10A0A075B651 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC13.7□□□□□ -0.22
Trav4-4-dv10A0A075B651 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC13.7□□□□□ -0.22
Trav4-4-dv10A0A075B651 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav4-4-dv10A0A075B651 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav4-4-dv10A0A075B651 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav4-4-dv10A0A075B651 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav4-4-dv10A0A075B651 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav4-4-dv10A0A075B651 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav4-4-dv10A0A075B651 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav4-4-dv10A0A075B651 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Trav4-4-dv10A0A075B651 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav4-4-dv10A0A075B651 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Trav4-4-dv10A0A075B651 Ap3s1-204ENSMUST00000225520 957 ntBASIC13.69□□□□□ -0.22
Trav4-4-dv10A0A075B651 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav4-4-dv10A0A075B651 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC13.69□□□□□ -0.22
Trav4-4-dv10A0A075B651 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav4-4-dv10A0A075B651 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav4-4-dv10A0A075B651 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav4-4-dv10A0A075B651 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav4-4-dv10A0A075B651 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav4-4-dv10A0A075B651 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav4-4-dv10A0A075B651 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav4-4-dv10A0A075B651 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav4-4-dv10A0A075B651 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav4-4-dv10A0A075B651 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav4-4-dv10A0A075B651 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav4-4-dv10A0A075B651 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav4-4-dv10A0A075B651 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav4-4-dv10A0A075B651 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC13.68□□□□□ -0.22
Trav4-4-dv10A0A075B651 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav4-4-dv10A0A075B651 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trav4-4-dv10A0A075B651 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav4-4-dv10A0A075B651 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav4-4-dv10A0A075B651 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC13.68□□□□□ -0.22
Trav4-4-dv10A0A075B651 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trav4-4-dv10A0A075B651 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trav4-4-dv10A0A075B651 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav4-4-dv10A0A075B651 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC13.68□□□□□ -0.22
Trav4-4-dv10A0A075B651 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav4-4-dv10A0A075B651 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav4-4-dv10A0A075B651 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trav4-4-dv10A0A075B651 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav4-4-dv10A0A075B651 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC13.67□□□□□ -0.22
Trav4-4-dv10A0A075B651 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav4-4-dv10A0A075B651 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav4-4-dv10A0A075B651 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC13.67□□□□□ -0.22
Trav4-4-dv10A0A075B651 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC13.67□□□□□ -0.22
Trav4-4-dv10A0A075B651 Gm16401-202ENSMUST00000197463 2074 ntBASIC13.67□□□□□ -0.22
Trav4-4-dv10A0A075B651 Gm38285-201ENSMUST00000192928 922 ntBASIC13.67□□□□□ -0.22
Trav4-4-dv10A0A075B651 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC13.67□□□□□ -0.22
Trav4-4-dv10A0A075B651 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Trav4-4-dv10A0A075B651 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trav4-4-dv10A0A075B651 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav4-4-dv10A0A075B651 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav4-4-dv10A0A075B651 Haglr-201ENSMUST00000100000 2085 ntBASIC13.67□□□□□ -0.22
Trav4-4-dv10A0A075B651 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav4-4-dv10A0A075B651 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav4-4-dv10A0A075B651 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav4-4-dv10A0A075B651 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav4-4-dv10A0A075B651 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav4-4-dv10A0A075B651 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav4-4-dv10A0A075B651 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC13.66□□□□□ -0.22
Trav4-4-dv10A0A075B651 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav4-4-dv10A0A075B651 Gm7514-201ENSMUST00000209475 934 ntBASIC13.66□□□□□ -0.22
Trav4-4-dv10A0A075B651 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav4-4-dv10A0A075B651 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trav4-4-dv10A0A075B651 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC13.66□□□□□ -0.22
Trav4-4-dv10A0A075B651 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Trav4-4-dv10A0A075B651 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trav4-4-dv10A0A075B651 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav4-4-dv10A0A075B651 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trav4-4-dv10A0A075B651 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trav4-4-dv10A0A075B651 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC13.66□□□□□ -0.22
Trav4-4-dv10A0A075B651 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC13.66□□□□□ -0.22
Trav4-4-dv10A0A075B651 Gm43272-201ENSMUST00000200599 1584 ntBASIC13.66□□□□□ -0.22
Trav4-4-dv10A0A075B651 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms