Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC21.78■■□□□ 1.08
SSX2IPQ9Y2D8 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.78■■□□□ 1.08
SSX2IPQ9Y2D8 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
SSX2IPQ9Y2D8 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SSX2IPQ9Y2D8 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
SSX2IPQ9Y2D8 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.77■■□□□ 1.08
SSX2IPQ9Y2D8 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.77■■□□□ 1.08
SSX2IPQ9Y2D8 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SSX2IPQ9Y2D8 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.77■■□□□ 1.08
SSX2IPQ9Y2D8 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.77■■□□□ 1.08
SSX2IPQ9Y2D8 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
SSX2IPQ9Y2D8 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SSX2IPQ9Y2D8 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
SSX2IPQ9Y2D8 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SSX2IPQ9Y2D8 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SSX2IPQ9Y2D8 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC21.77■■□□□ 1.08
SSX2IPQ9Y2D8 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC21.77■■□□□ 1.08
SSX2IPQ9Y2D8 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC21.77■■□□□ 1.08
SSX2IPQ9Y2D8 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.77■■□□□ 1.08
SSX2IPQ9Y2D8 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC21.77■■□□□ 1.08
SSX2IPQ9Y2D8 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC21.77■■□□□ 1.08
SSX2IPQ9Y2D8 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SSX2IPQ9Y2D8 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SSX2IPQ9Y2D8 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SSX2IPQ9Y2D8 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
SSX2IPQ9Y2D8 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.77■■□□□ 1.07
SSX2IPQ9Y2D8 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SSX2IPQ9Y2D8 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SSX2IPQ9Y2D8 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
SSX2IPQ9Y2D8 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.76■■□□□ 1.07
SSX2IPQ9Y2D8 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SSX2IPQ9Y2D8 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SSX2IPQ9Y2D8 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SSX2IPQ9Y2D8 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC21.76■■□□□ 1.07
SSX2IPQ9Y2D8 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
SSX2IPQ9Y2D8 MIR4497-201ENST00000583208 89 ntBASIC21.76■■□□□ 1.07
SSX2IPQ9Y2D8 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC21.76■■□□□ 1.07
SSX2IPQ9Y2D8 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.76■■□□□ 1.07
SSX2IPQ9Y2D8 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.76■■□□□ 1.07
SSX2IPQ9Y2D8 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
SSX2IPQ9Y2D8 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SSX2IPQ9Y2D8 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SSX2IPQ9Y2D8 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
SSX2IPQ9Y2D8 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.75■■□□□ 1.07
SSX2IPQ9Y2D8 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SSX2IPQ9Y2D8 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SSX2IPQ9Y2D8 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SSX2IPQ9Y2D8 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SSX2IPQ9Y2D8 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SSX2IPQ9Y2D8 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SSX2IPQ9Y2D8 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
SSX2IPQ9Y2D8 AL390719.1-204ENST00000412397 1219 ntBASIC21.75■■□□□ 1.07
SSX2IPQ9Y2D8 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SSX2IPQ9Y2D8 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SSX2IPQ9Y2D8 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SSX2IPQ9Y2D8 AL356652.1-201ENST00000615962 565 ntBASIC21.75■■□□□ 1.07
SSX2IPQ9Y2D8 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
SSX2IPQ9Y2D8 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
SSX2IPQ9Y2D8 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SSX2IPQ9Y2D8 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SSX2IPQ9Y2D8 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC21.75■■□□□ 1.07
SSX2IPQ9Y2D8 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
SSX2IPQ9Y2D8 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.75■■□□□ 1.07
SSX2IPQ9Y2D8 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
SSX2IPQ9Y2D8 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.75■■□□□ 1.07
SSX2IPQ9Y2D8 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.75■■□□□ 1.07
SSX2IPQ9Y2D8 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.75■■□□□ 1.07
SSX2IPQ9Y2D8 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SSX2IPQ9Y2D8 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SSX2IPQ9Y2D8 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
SSX2IPQ9Y2D8 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
SSX2IPQ9Y2D8 ISG20-202ENST00000379224 540 ntTSL 3 BASIC21.74■■□□□ 1.07
SSX2IPQ9Y2D8 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC21.74■■□□□ 1.07
SSX2IPQ9Y2D8 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC21.74■■□□□ 1.07
SSX2IPQ9Y2D8 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC21.74■■□□□ 1.07
SSX2IPQ9Y2D8 AC005829.2-201ENST00000571422 1056 ntBASIC21.74■■□□□ 1.07
SSX2IPQ9Y2D8 AC233263.1-201ENST00000578059 224 ntBASIC21.74■■□□□ 1.07
SSX2IPQ9Y2D8 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC21.74■■□□□ 1.07
SSX2IPQ9Y2D8 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
SSX2IPQ9Y2D8 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
SSX2IPQ9Y2D8 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SSX2IPQ9Y2D8 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC21.74■■□□□ 1.07
SSX2IPQ9Y2D8 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.74■■□□□ 1.07
SSX2IPQ9Y2D8 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SSX2IPQ9Y2D8 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.74■■□□□ 1.07
SSX2IPQ9Y2D8 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SSX2IPQ9Y2D8 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SSX2IPQ9Y2D8 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SSX2IPQ9Y2D8 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
SSX2IPQ9Y2D8 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SSX2IPQ9Y2D8 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SSX2IPQ9Y2D8 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SSX2IPQ9Y2D8 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC21.73■■□□□ 1.07
SSX2IPQ9Y2D8 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SSX2IPQ9Y2D8 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SSX2IPQ9Y2D8 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC21.73■■□□□ 1.07
SSX2IPQ9Y2D8 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC21.73■■□□□ 1.07
SSX2IPQ9Y2D8 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SSX2IPQ9Y2D8 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SSX2IPQ9Y2D8 AC120498.8-201ENST00000614275 531 ntBASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms