Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Nkx2-4Q9EQM3 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nkx2-4Q9EQM3 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nkx2-4Q9EQM3 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nkx2-4Q9EQM3 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Nkx2-4Q9EQM3 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nkx2-4Q9EQM3 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Nkx2-4Q9EQM3 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
Nkx2-4Q9EQM3 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.05■□□□□ 0.48
Nkx2-4Q9EQM3 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Nkx2-4Q9EQM3 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nkx2-4Q9EQM3 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nkx2-4Q9EQM3 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.04■□□□□ 0.48
Nkx2-4Q9EQM3 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nkx2-4Q9EQM3 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Nkx2-4Q9EQM3 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nkx2-4Q9EQM3 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nkx2-4Q9EQM3 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nkx2-4Q9EQM3 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Nkx2-4Q9EQM3 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC18.04■□□□□ 0.48
Nkx2-4Q9EQM3 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nkx2-4Q9EQM3 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nkx2-4Q9EQM3 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nkx2-4Q9EQM3 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nkx2-4Q9EQM3 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC18.04■□□□□ 0.48
Nkx2-4Q9EQM3 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nkx2-4Q9EQM3 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nkx2-4Q9EQM3 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Nkx2-4Q9EQM3 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nkx2-4Q9EQM3 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Nkx2-4Q9EQM3 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.03■□□□□ 0.48
Nkx2-4Q9EQM3 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Nkx2-4Q9EQM3 Gm11452-201ENSMUST00000122376 690 ntBASIC18.03■□□□□ 0.48
Nkx2-4Q9EQM3 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Nkx2-4Q9EQM3 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC18.03■□□□□ 0.48
Nkx2-4Q9EQM3 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nkx2-4Q9EQM3 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Nkx2-4Q9EQM3 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC18.03■□□□□ 0.48
Nkx2-4Q9EQM3 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC18.03■□□□□ 0.48
Nkx2-4Q9EQM3 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC18.03■□□□□ 0.48
Nkx2-4Q9EQM3 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nkx2-4Q9EQM3 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nkx2-4Q9EQM3 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nkx2-4Q9EQM3 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.03■□□□□ 0.48
Nkx2-4Q9EQM3 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Nkx2-4Q9EQM3 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nkx2-4Q9EQM3 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nkx2-4Q9EQM3 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Nkx2-4Q9EQM3 Actl10-202ENSMUST00000226583 1501 ntBASIC18.03■□□□□ 0.48
Nkx2-4Q9EQM3 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nkx2-4Q9EQM3 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Nkx2-4Q9EQM3 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nkx2-4Q9EQM3 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
Nkx2-4Q9EQM3 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nkx2-4Q9EQM3 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Nkx2-4Q9EQM3 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Nkx2-4Q9EQM3 Gm18733-201ENSMUST00000173950 856 ntBASIC18.02■□□□□ 0.48
Nkx2-4Q9EQM3 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC18.02■□□□□ 0.48
Nkx2-4Q9EQM3 Ighv6-1-201ENSMUST00000193612 343 ntBASIC18.02■□□□□ 0.48
Nkx2-4Q9EQM3 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.02■□□□□ 0.48
Nkx2-4Q9EQM3 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Nkx2-4Q9EQM3 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.02■□□□□ 0.48
Nkx2-4Q9EQM3 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nkx2-4Q9EQM3 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Nkx2-4Q9EQM3 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.02■□□□□ 0.47
Nkx2-4Q9EQM3 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Nkx2-4Q9EQM3 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Nkx2-4Q9EQM3 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nkx2-4Q9EQM3 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nkx2-4Q9EQM3 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nkx2-4Q9EQM3 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC18.01■□□□□ 0.47
Nkx2-4Q9EQM3 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC18.01■□□□□ 0.47
Nkx2-4Q9EQM3 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.01■□□□□ 0.47
Nkx2-4Q9EQM3 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC18.01■□□□□ 0.47
Nkx2-4Q9EQM3 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18■□□□□ 0.47
Nkx2-4Q9EQM3 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18■□□□□ 0.47
Nkx2-4Q9EQM3 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18■□□□□ 0.47
Nkx2-4Q9EQM3 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18■□□□□ 0.47
Nkx2-4Q9EQM3 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Nkx2-4Q9EQM3 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
Nkx2-4Q9EQM3 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC18■□□□□ 0.47
Nkx2-4Q9EQM3 Gm29791-202ENSMUST00000207888 369 ntBASIC18■□□□□ 0.47
Nkx2-4Q9EQM3 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18■□□□□ 0.47
Nkx2-4Q9EQM3 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18■□□□□ 0.47
Nkx2-4Q9EQM3 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC18■□□□□ 0.47
Nkx2-4Q9EQM3 Gm38308-201ENSMUST00000194934 1809 ntBASIC18■□□□□ 0.47
Nkx2-4Q9EQM3 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nkx2-4Q9EQM3 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nkx2-4Q9EQM3 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Nkx2-4Q9EQM3 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.99■□□□□ 0.47
Nkx2-4Q9EQM3 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nkx2-4Q9EQM3 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nkx2-4Q9EQM3 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nkx2-4Q9EQM3 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nkx2-4Q9EQM3 AC124569.2-201ENSMUST00000225998 818 ntBASIC17.99■□□□□ 0.47
Nkx2-4Q9EQM3 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nkx2-4Q9EQM3 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Nkx2-4Q9EQM3 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.99■□□□□ 0.47
Nkx2-4Q9EQM3 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nkx2-4Q9EQM3 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms