Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Upk1aQ9D132 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Upk1aQ9D132 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Upk1aQ9D132 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Upk1aQ9D132 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Upk1aQ9D132 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Upk1aQ9D132 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Upk1aQ9D132 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Upk1aQ9D132 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Upk1aQ9D132 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Upk1aQ9D132 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.68■□□□□ 0.26
Upk1aQ9D132 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Upk1aQ9D132 Nespas-201ENSMUST00000143738 1083 ntBASIC16.68■□□□□ 0.26
Upk1aQ9D132 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC16.68■□□□□ 0.26
Upk1aQ9D132 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Upk1aQ9D132 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Upk1aQ9D132 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Upk1aQ9D132 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
Upk1aQ9D132 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Upk1aQ9D132 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.68■□□□□ 0.26
Upk1aQ9D132 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Upk1aQ9D132 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Upk1aQ9D132 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Upk1aQ9D132 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.68■□□□□ 0.26
Upk1aQ9D132 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Upk1aQ9D132 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Upk1aQ9D132 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Upk1aQ9D132 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Upk1aQ9D132 Dancr-204ENSMUST00000132389 2347 ntBASIC16.67■□□□□ 0.26
Upk1aQ9D132 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Upk1aQ9D132 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.67■□□□□ 0.26
Upk1aQ9D132 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Upk1aQ9D132 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Upk1aQ9D132 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Upk1aQ9D132 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Upk1aQ9D132 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Upk1aQ9D132 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Upk1aQ9D132 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.67■□□□□ 0.26
Upk1aQ9D132 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.67■□□□□ 0.26
Upk1aQ9D132 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Upk1aQ9D132 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Upk1aQ9D132 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.66■□□□□ 0.26
Upk1aQ9D132 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Upk1aQ9D132 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Upk1aQ9D132 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Upk1aQ9D132 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Upk1aQ9D132 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Upk1aQ9D132 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Upk1aQ9D132 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.66■□□□□ 0.26
Upk1aQ9D132 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC16.66■□□□□ 0.26
Upk1aQ9D132 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Upk1aQ9D132 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.66■□□□□ 0.26
Upk1aQ9D132 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Upk1aQ9D132 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Upk1aQ9D132 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Upk1aQ9D132 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Upk1aQ9D132 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC16.65■□□□□ 0.26
Upk1aQ9D132 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Upk1aQ9D132 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC16.65■□□□□ 0.26
Upk1aQ9D132 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
Upk1aQ9D132 Gm10033-202ENSMUST00000211874 928 ntBASIC16.65■□□□□ 0.26
Upk1aQ9D132 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Upk1aQ9D132 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Upk1aQ9D132 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Upk1aQ9D132 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Upk1aQ9D132 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Upk1aQ9D132 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Upk1aQ9D132 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Upk1aQ9D132 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Upk1aQ9D132 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Upk1aQ9D132 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Upk1aQ9D132 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Upk1aQ9D132 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Upk1aQ9D132 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.65■□□□□ 0.26
Upk1aQ9D132 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Upk1aQ9D132 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Upk1aQ9D132 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Upk1aQ9D132 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Upk1aQ9D132 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Upk1aQ9D132 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Upk1aQ9D132 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16.64■□□□□ 0.25
Upk1aQ9D132 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
Upk1aQ9D132 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Upk1aQ9D132 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Upk1aQ9D132 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Upk1aQ9D132 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Upk1aQ9D132 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Upk1aQ9D132 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Upk1aQ9D132 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Upk1aQ9D132 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Upk1aQ9D132 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Upk1aQ9D132 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Upk1aQ9D132 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC16.63■□□□□ 0.25
Upk1aQ9D132 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Upk1aQ9D132 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Upk1aQ9D132 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.63■□□□□ 0.25
Upk1aQ9D132 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Upk1aQ9D132 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Upk1aQ9D132 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Upk1aQ9D132 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms