Protein–RNA interactions for Protein: Q9CQU3

Rer1, Protein RER1, mousemouse

Known RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rer1Q9CQU3 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rer1Q9CQU3 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC14.4□□□□□ -0.1
Rer1Q9CQU3 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC14.4□□□□□ -0.1
Rer1Q9CQU3 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rer1Q9CQU3 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rer1Q9CQU3 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rer1Q9CQU3 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rer1Q9CQU3 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rer1Q9CQU3 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rer1Q9CQU3 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rer1Q9CQU3 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rer1Q9CQU3 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Rer1Q9CQU3 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rer1Q9CQU3 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Rer1Q9CQU3 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rer1Q9CQU3 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rer1Q9CQU3 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rer1Q9CQU3 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rer1Q9CQU3 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rer1Q9CQU3 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rer1Q9CQU3 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Rer1Q9CQU3 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC14.39□□□□□ -0.11
Rer1Q9CQU3 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC14.39□□□□□ -0.11
Rer1Q9CQU3 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC14.39□□□□□ -0.11
Rer1Q9CQU3 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rer1Q9CQU3 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC14.39□□□□□ -0.11
Rer1Q9CQU3 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rer1Q9CQU3 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rer1Q9CQU3 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rer1Q9CQU3 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rer1Q9CQU3 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rer1Q9CQU3 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
Rer1Q9CQU3 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC14.39□□□□□ -0.11
Rer1Q9CQU3 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rer1Q9CQU3 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Rer1Q9CQU3 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rer1Q9CQU3 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rer1Q9CQU3 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rer1Q9CQU3 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC14.38□□□□□ -0.11
Rer1Q9CQU3 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rer1Q9CQU3 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rer1Q9CQU3 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rer1Q9CQU3 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rer1Q9CQU3 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rer1Q9CQU3 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC14.38□□□□□ -0.11
Rer1Q9CQU3 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC14.38□□□□□ -0.11
Rer1Q9CQU3 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC14.38□□□□□ -0.11
Rer1Q9CQU3 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC14.38□□□□□ -0.11
Rer1Q9CQU3 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rer1Q9CQU3 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rer1Q9CQU3 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rer1Q9CQU3 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Rer1Q9CQU3 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rer1Q9CQU3 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rer1Q9CQU3 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Rer1Q9CQU3 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rer1Q9CQU3 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rer1Q9CQU3 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC14.38□□□□□ -0.11
Rer1Q9CQU3 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Rer1Q9CQU3 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rer1Q9CQU3 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rer1Q9CQU3 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Rer1Q9CQU3 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Rer1Q9CQU3 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Rer1Q9CQU3 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Rer1Q9CQU3 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rer1Q9CQU3 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rer1Q9CQU3 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rer1Q9CQU3 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rer1Q9CQU3 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rer1Q9CQU3 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Rer1Q9CQU3 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rer1Q9CQU3 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Rer1Q9CQU3 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC14.37□□□□□ -0.11
Rer1Q9CQU3 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rer1Q9CQU3 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rer1Q9CQU3 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Rer1Q9CQU3 Gm38285-201ENSMUST00000192928 922 ntBASIC14.37□□□□□ -0.11
Rer1Q9CQU3 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rer1Q9CQU3 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Rer1Q9CQU3 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rer1Q9CQU3 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rer1Q9CQU3 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rer1Q9CQU3 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Rer1Q9CQU3 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rer1Q9CQU3 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rer1Q9CQU3 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rer1Q9CQU3 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rer1Q9CQU3 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rer1Q9CQU3 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Rer1Q9CQU3 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC14.36□□□□□ -0.11
Rer1Q9CQU3 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rer1Q9CQU3 Gm44549-201ENSMUST00000208351 577 ntBASIC14.36□□□□□ -0.11
Rer1Q9CQU3 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Rer1Q9CQU3 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC14.36□□□□□ -0.11
Rer1Q9CQU3 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rer1Q9CQU3 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rer1Q9CQU3 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rer1Q9CQU3 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rer1Q9CQU3 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms