Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
LRRC46Q96FV0 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC46Q96FV0 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.2■□□□□ 0.5
LRRC46Q96FV0 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC46Q96FV0 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.19■□□□□ 0.5
LRRC46Q96FV0 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
LRRC46Q96FV0 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC46Q96FV0 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
LRRC46Q96FV0 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC46Q96FV0 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
LRRC46Q96FV0 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC46Q96FV0 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC46Q96FV0 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
LRRC46Q96FV0 AL355472.2-201ENST00000422958 438 ntBASIC18.19■□□□□ 0.5
LRRC46Q96FV0 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC46Q96FV0 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.19■□□□□ 0.5
LRRC46Q96FV0 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.19■□□□□ 0.5
LRRC46Q96FV0 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
LRRC46Q96FV0 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.19■□□□□ 0.5
LRRC46Q96FV0 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.19■□□□□ 0.5
LRRC46Q96FV0 AC026310.3-201ENST00000625186 2373 ntBASIC18.19■□□□□ 0.5
LRRC46Q96FV0 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
LRRC46Q96FV0 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC46Q96FV0 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC46Q96FV0 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC46Q96FV0 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.18■□□□□ 0.5
LRRC46Q96FV0 RPS2P52-201ENST00000469610 820 ntBASIC18.18■□□□□ 0.5
LRRC46Q96FV0 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.18■□□□□ 0.5
LRRC46Q96FV0 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC46Q96FV0 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC46Q96FV0 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.18■□□□□ 0.5
LRRC46Q96FV0 KRT17P1-201ENST00000399211 1546 ntBASIC18.18■□□□□ 0.5
LRRC46Q96FV0 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC46Q96FV0 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC46Q96FV0 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.17■□□□□ 0.5
LRRC46Q96FV0 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC46Q96FV0 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.17■□□□□ 0.5
LRRC46Q96FV0 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC46Q96FV0 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
LRRC46Q96FV0 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC46Q96FV0 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
LRRC46Q96FV0 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.17■□□□□ 0.5
LRRC46Q96FV0 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.17■□□□□ 0.5
LRRC46Q96FV0 UBE2SP1-201ENST00000450587 669 ntBASIC18.17■□□□□ 0.5
LRRC46Q96FV0 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
LRRC46Q96FV0 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC46Q96FV0 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC46Q96FV0 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
LRRC46Q96FV0 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC46Q96FV0 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.17■□□□□ 0.5
LRRC46Q96FV0 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LRRC46Q96FV0 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRRC46Q96FV0 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.16■□□□□ 0.5
LRRC46Q96FV0 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRRC46Q96FV0 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.16■□□□□ 0.5
LRRC46Q96FV0 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRRC46Q96FV0 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRRC46Q96FV0 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
LRRC46Q96FV0 PGM5P4-201ENST00000421970 445 ntBASIC18.16■□□□□ 0.5
LRRC46Q96FV0 AC098590.1-201ENST00000468126 897 ntBASIC18.16■□□□□ 0.5
LRRC46Q96FV0 UNC93B4-201ENST00000505679 747 ntBASIC18.16■□□□□ 0.5
LRRC46Q96FV0 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
LRRC46Q96FV0 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.16■□□□□ 0.5
LRRC46Q96FV0 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
LRRC46Q96FV0 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
LRRC46Q96FV0 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.15■□□□□ 0.5
LRRC46Q96FV0 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.15■□□□□ 0.5
LRRC46Q96FV0 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC46Q96FV0 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC46Q96FV0 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.15■□□□□ 0.5
LRRC46Q96FV0 MIR718-201ENST00000390190 70 ntBASIC18.15■□□□□ 0.5
LRRC46Q96FV0 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.15■□□□□ 0.5
LRRC46Q96FV0 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
LRRC46Q96FV0 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC46Q96FV0 RPS2P4-201ENST00000476944 856 ntBASIC18.15■□□□□ 0.5
LRRC46Q96FV0 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC46Q96FV0 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.15■□□□□ 0.5
LRRC46Q96FV0 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.15■□□□□ 0.5
LRRC46Q96FV0 FAM197Y4-202ENST00000622692 608 ntBASIC18.15■□□□□ 0.5
LRRC46Q96FV0 AC073648.6-201ENST00000641589 218 ntBASIC18.15■□□□□ 0.5
LRRC46Q96FV0 AC092368.3-202ENST00000574180 1591 ntBASIC18.15■□□□□ 0.5
LRRC46Q96FV0 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC46Q96FV0 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC46Q96FV0 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC46Q96FV0 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC46Q96FV0 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.15■□□□□ 0.5
LRRC46Q96FV0 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC46Q96FV0 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC46Q96FV0 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC46Q96FV0 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC46Q96FV0 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.14■□□□□ 0.49
LRRC46Q96FV0 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.14■□□□□ 0.49
LRRC46Q96FV0 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.14■□□□□ 0.49
LRRC46Q96FV0 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.14■□□□□ 0.49
LRRC46Q96FV0 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.14■□□□□ 0.49
LRRC46Q96FV0 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
LRRC46Q96FV0 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.14■□□□□ 0.49
LRRC46Q96FV0 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.14■□□□□ 0.49
LRRC46Q96FV0 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.14■□□□□ 0.49
LRRC46Q96FV0 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms