Protein–RNA interactions for Protein: Q91Y10

Pcdhac1, Protocadherin alpha C1, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1Q91Y10 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhac1Q91Y10 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhac1Q91Y10 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Pcdhac1Q91Y10 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhac1Q91Y10 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Pcdhac1Q91Y10 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhac1Q91Y10 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Pcdhac1Q91Y10 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhac1Q91Y10 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhac1Q91Y10 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhac1Q91Y10 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhac1Q91Y10 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Pcdhac1Q91Y10 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhac1Q91Y10 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.45■□□□□ 0.22
Pcdhac1Q91Y10 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhac1Q91Y10 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Pcdhac1Q91Y10 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Pcdhac1Q91Y10 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhac1Q91Y10 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhac1Q91Y10 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhac1Q91Y10 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhac1Q91Y10 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhac1Q91Y10 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhac1Q91Y10 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhac1Q91Y10 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.45■□□□□ 0.22
Pcdhac1Q91Y10 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhac1Q91Y10 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhac1Q91Y10 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhac1Q91Y10 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.44■□□□□ 0.22
Pcdhac1Q91Y10 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhac1Q91Y10 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhac1Q91Y10 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhac1Q91Y10 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhac1Q91Y10 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhac1Q91Y10 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhac1Q91Y10 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Pcdhac1Q91Y10 Gm13148-201ENSMUST00000118892 745 ntBASIC16.44■□□□□ 0.22
Pcdhac1Q91Y10 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhac1Q91Y10 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhac1Q91Y10 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhac1Q91Y10 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhac1Q91Y10 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhac1Q91Y10 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhac1Q91Y10 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhac1Q91Y10 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Pcdhac1Q91Y10 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Pcdhac1Q91Y10 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhac1Q91Y10 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhac1Q91Y10 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.44■□□□□ 0.22
Pcdhac1Q91Y10 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhac1Q91Y10 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhac1Q91Y10 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhac1Q91Y10 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhac1Q91Y10 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhac1Q91Y10 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.43■□□□□ 0.22
Pcdhac1Q91Y10 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhac1Q91Y10 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhac1Q91Y10 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.43■□□□□ 0.22
Pcdhac1Q91Y10 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhac1Q91Y10 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhac1Q91Y10 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhac1Q91Y10 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhac1Q91Y10 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Pcdhac1Q91Y10 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhac1Q91Y10 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhac1Q91Y10 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhac1Q91Y10 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.43■□□□□ 0.22
Pcdhac1Q91Y10 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhac1Q91Y10 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhac1Q91Y10 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhac1Q91Y10 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhac1Q91Y10 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhac1Q91Y10 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Pcdhac1Q91Y10 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhac1Q91Y10 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhac1Q91Y10 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
Pcdhac1Q91Y10 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.42■□□□□ 0.22
Pcdhac1Q91Y10 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhac1Q91Y10 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhac1Q91Y10 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhac1Q91Y10 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhac1Q91Y10 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.42■□□□□ 0.22
Pcdhac1Q91Y10 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhac1Q91Y10 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16.42■□□□□ 0.22
Pcdhac1Q91Y10 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Pcdhac1Q91Y10 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhac1Q91Y10 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhac1Q91Y10 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhac1Q91Y10 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Pcdhac1Q91Y10 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
Pcdhac1Q91Y10 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhac1Q91Y10 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.42■□□□□ 0.22
Pcdhac1Q91Y10 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.42■□□□□ 0.22
Pcdhac1Q91Y10 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhac1Q91Y10 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhac1Q91Y10 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhac1Q91Y10 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhac1Q91Y10 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhac1Q91Y10 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhac1Q91Y10 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms