Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.63■□□□□ 0.41
Vps39Q8R5L3 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.63■□□□□ 0.41
Vps39Q8R5L3 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vps39Q8R5L3 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vps39Q8R5L3 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Vps39Q8R5L3 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vps39Q8R5L3 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Vps39Q8R5L3 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.62■□□□□ 0.41
Vps39Q8R5L3 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Vps39Q8R5L3 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vps39Q8R5L3 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vps39Q8R5L3 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Vps39Q8R5L3 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vps39Q8R5L3 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vps39Q8R5L3 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vps39Q8R5L3 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vps39Q8R5L3 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps39Q8R5L3 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps39Q8R5L3 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Vps39Q8R5L3 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps39Q8R5L3 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Vps39Q8R5L3 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps39Q8R5L3 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps39Q8R5L3 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps39Q8R5L3 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps39Q8R5L3 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps39Q8R5L3 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps39Q8R5L3 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Vps39Q8R5L3 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps39Q8R5L3 Gm29791-202ENSMUST00000207888 369 ntBASIC17.61■□□□□ 0.41
Vps39Q8R5L3 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.61■□□□□ 0.41
Vps39Q8R5L3 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps39Q8R5L3 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Vps39Q8R5L3 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps39Q8R5L3 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps39Q8R5L3 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Vps39Q8R5L3 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps39Q8R5L3 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
Vps39Q8R5L3 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps39Q8R5L3 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Vps39Q8R5L3 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps39Q8R5L3 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Vps39Q8R5L3 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps39Q8R5L3 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Vps39Q8R5L3 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps39Q8R5L3 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps39Q8R5L3 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps39Q8R5L3 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.6■□□□□ 0.41
Vps39Q8R5L3 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.6■□□□□ 0.41
Vps39Q8R5L3 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps39Q8R5L3 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps39Q8R5L3 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps39Q8R5L3 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.6■□□□□ 0.41
Vps39Q8R5L3 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Vps39Q8R5L3 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps39Q8R5L3 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Vps39Q8R5L3 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps39Q8R5L3 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps39Q8R5L3 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps39Q8R5L3 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.6■□□□□ 0.41
Vps39Q8R5L3 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Vps39Q8R5L3 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps39Q8R5L3 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps39Q8R5L3 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps39Q8R5L3 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps39Q8R5L3 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Vps39Q8R5L3 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps39Q8R5L3 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Vps39Q8R5L3 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Vps39Q8R5L3 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps39Q8R5L3 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps39Q8R5L3 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps39Q8R5L3 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Vps39Q8R5L3 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.59■□□□□ 0.41
Vps39Q8R5L3 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Vps39Q8R5L3 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps39Q8R5L3 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps39Q8R5L3 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.59■□□□□ 0.41
Vps39Q8R5L3 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps39Q8R5L3 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Vps39Q8R5L3 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Vps39Q8R5L3 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Vps39Q8R5L3 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Vps39Q8R5L3 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Vps39Q8R5L3 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Vps39Q8R5L3 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Vps39Q8R5L3 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
Vps39Q8R5L3 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.58■□□□□ 0.4
Vps39Q8R5L3 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Vps39Q8R5L3 Gm37179-201ENSMUST00000194862 823 ntBASIC17.58■□□□□ 0.4
Vps39Q8R5L3 Gm5408-201ENSMUST00000197998 747 ntBASIC17.58■□□□□ 0.4
Vps39Q8R5L3 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vps39Q8R5L3 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Vps39Q8R5L3 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vps39Q8R5L3 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vps39Q8R5L3 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vps39Q8R5L3 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vps39Q8R5L3 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vps39Q8R5L3 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vps39Q8R5L3 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms