Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cchcr1Q8K2I2 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Cchcr1Q8K2I2 Mir2861-201ENSMUST00000175539 82 ntBASIC20.82■□□□□ 0.92
Cchcr1Q8K2I2 Mir8112-201ENSMUST00000184382 131 ntBASIC20.82■□□□□ 0.92
Cchcr1Q8K2I2 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.82■□□□□ 0.92
Cchcr1Q8K2I2 AC122769.4-201ENSMUST00000228166 901 ntBASIC20.82■□□□□ 0.92
Cchcr1Q8K2I2 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cchcr1Q8K2I2 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Cchcr1Q8K2I2 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cchcr1Q8K2I2 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Cchcr1Q8K2I2 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cchcr1Q8K2I2 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cchcr1Q8K2I2 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Cchcr1Q8K2I2 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cchcr1Q8K2I2 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cchcr1Q8K2I2 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cchcr1Q8K2I2 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Cchcr1Q8K2I2 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cchcr1Q8K2I2 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cchcr1Q8K2I2 Gm15847-201ENSMUST00000121417 1065 ntBASIC20.81■□□□□ 0.92
Cchcr1Q8K2I2 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.81■□□□□ 0.92
Cchcr1Q8K2I2 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cchcr1Q8K2I2 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cchcr1Q8K2I2 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cchcr1Q8K2I2 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cchcr1Q8K2I2 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cchcr1Q8K2I2 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cchcr1Q8K2I2 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cchcr1Q8K2I2 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cchcr1Q8K2I2 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cchcr1Q8K2I2 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Cchcr1Q8K2I2 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC20.8■□□□□ 0.92
Cchcr1Q8K2I2 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cchcr1Q8K2I2 Gm37179-201ENSMUST00000194862 823 ntBASIC20.8■□□□□ 0.92
Cchcr1Q8K2I2 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cchcr1Q8K2I2 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cchcr1Q8K2I2 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cchcr1Q8K2I2 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cchcr1Q8K2I2 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC20.8■□□□□ 0.92
Cchcr1Q8K2I2 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cchcr1Q8K2I2 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC20.79■□□□□ 0.92
Cchcr1Q8K2I2 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cchcr1Q8K2I2 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cchcr1Q8K2I2 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Cchcr1Q8K2I2 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
Cchcr1Q8K2I2 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cchcr1Q8K2I2 Gm5408-201ENSMUST00000197998 747 ntBASIC20.79■□□□□ 0.92
Cchcr1Q8K2I2 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cchcr1Q8K2I2 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cchcr1Q8K2I2 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cchcr1Q8K2I2 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Cchcr1Q8K2I2 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cchcr1Q8K2I2 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cchcr1Q8K2I2 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Cchcr1Q8K2I2 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cchcr1Q8K2I2 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cchcr1Q8K2I2 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Cchcr1Q8K2I2 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC20.78■□□□□ 0.92
Cchcr1Q8K2I2 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.78■□□□□ 0.92
Cchcr1Q8K2I2 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Cchcr1Q8K2I2 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Cchcr1Q8K2I2 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cchcr1Q8K2I2 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Cchcr1Q8K2I2 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
Cchcr1Q8K2I2 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cchcr1Q8K2I2 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cchcr1Q8K2I2 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cchcr1Q8K2I2 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cchcr1Q8K2I2 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cchcr1Q8K2I2 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC20.77■□□□□ 0.92
Cchcr1Q8K2I2 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Cchcr1Q8K2I2 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
Cchcr1Q8K2I2 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cchcr1Q8K2I2 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.77■□□□□ 0.92
Cchcr1Q8K2I2 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Cchcr1Q8K2I2 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cchcr1Q8K2I2 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cchcr1Q8K2I2 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cchcr1Q8K2I2 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Cchcr1Q8K2I2 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.91
Cchcr1Q8K2I2 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Cchcr1Q8K2I2 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Cchcr1Q8K2I2 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Cchcr1Q8K2I2 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cchcr1Q8K2I2 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Cchcr1Q8K2I2 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cchcr1Q8K2I2 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Cchcr1Q8K2I2 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cchcr1Q8K2I2 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.76■□□□□ 0.91
Cchcr1Q8K2I2 Gm2559-201ENSMUST00000201323 363 ntBASIC20.76■□□□□ 0.91
Cchcr1Q8K2I2 Gm44672-201ENSMUST00000206944 1098 ntBASIC20.76■□□□□ 0.91
Cchcr1Q8K2I2 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cchcr1Q8K2I2 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cchcr1Q8K2I2 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cchcr1Q8K2I2 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cchcr1Q8K2I2 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cchcr1Q8K2I2 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cchcr1Q8K2I2 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cchcr1Q8K2I2 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cchcr1Q8K2I2 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms