Protein–RNA interactions for Protein: Q8CE13

Ccdc17, Coiled-coil domain-containing protein 17, mousemouse

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc17Q8CE13 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc17Q8CE13 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc17Q8CE13 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Ccdc17Q8CE13 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Ccdc17Q8CE13 Gm10517-202ENSMUST00000192970 758 ntBASIC18.2■□□□□ 0.5
Ccdc17Q8CE13 Gm33142-201ENSMUST00000193913 867 ntBASIC18.2■□□□□ 0.5
Ccdc17Q8CE13 Gm45058-201ENSMUST00000205810 766 ntBASIC18.2■□□□□ 0.5
Ccdc17Q8CE13 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc17Q8CE13 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc17Q8CE13 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Ccdc17Q8CE13 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc17Q8CE13 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc17Q8CE13 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc17Q8CE13 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc17Q8CE13 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Ccdc17Q8CE13 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc17Q8CE13 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.19■□□□□ 0.5
Ccdc17Q8CE13 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc17Q8CE13 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc17Q8CE13 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc17Q8CE13 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc17Q8CE13 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc17Q8CE13 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Ccdc17Q8CE13 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc17Q8CE13 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.19■□□□□ 0.5
Ccdc17Q8CE13 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc17Q8CE13 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC18.19■□□□□ 0.5
Ccdc17Q8CE13 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.19■□□□□ 0.5
Ccdc17Q8CE13 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.19■□□□□ 0.5
Ccdc17Q8CE13 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.19■□□□□ 0.5
Ccdc17Q8CE13 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc17Q8CE13 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc17Q8CE13 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc17Q8CE13 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc17Q8CE13 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.19■□□□□ 0.5
Ccdc17Q8CE13 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc17Q8CE13 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc17Q8CE13 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc17Q8CE13 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Ccdc17Q8CE13 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc17Q8CE13 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc17Q8CE13 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc17Q8CE13 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc17Q8CE13 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc17Q8CE13 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc17Q8CE13 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc17Q8CE13 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.18■□□□□ 0.5
Ccdc17Q8CE13 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.18■□□□□ 0.5
Ccdc17Q8CE13 Gm18032-201ENSMUST00000222541 538 ntBASIC18.18■□□□□ 0.5
Ccdc17Q8CE13 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc17Q8CE13 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.18■□□□□ 0.5
Ccdc17Q8CE13 AC154231.1-201ENSMUST00000220564 2175 ntBASIC18.18■□□□□ 0.5
Ccdc17Q8CE13 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC18.18■□□□□ 0.5
Ccdc17Q8CE13 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc17Q8CE13 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc17Q8CE13 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.17■□□□□ 0.5
Ccdc17Q8CE13 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Ccdc17Q8CE13 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC18.17■□□□□ 0.5
Ccdc17Q8CE13 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Ccdc17Q8CE13 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.17■□□□□ 0.5
Ccdc17Q8CE13 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Ccdc17Q8CE13 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.17■□□□□ 0.5
Ccdc17Q8CE13 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc17Q8CE13 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.17■□□□□ 0.5
Ccdc17Q8CE13 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc17Q8CE13 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc17Q8CE13 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc17Q8CE13 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.16■□□□□ 0.5
Ccdc17Q8CE13 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc17Q8CE13 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc17Q8CE13 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Ccdc17Q8CE13 Gm14859-201ENSMUST00000117752 357 ntBASIC18.16■□□□□ 0.5
Ccdc17Q8CE13 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc17Q8CE13 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc17Q8CE13 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc17Q8CE13 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.16■□□□□ 0.5
Ccdc17Q8CE13 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Ccdc17Q8CE13 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.16■□□□□ 0.5
Ccdc17Q8CE13 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.16■□□□□ 0.5
Ccdc17Q8CE13 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc17Q8CE13 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc17Q8CE13 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.15■□□□□ 0.5
Ccdc17Q8CE13 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc17Q8CE13 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc17Q8CE13 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Ccdc17Q8CE13 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc17Q8CE13 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc17Q8CE13 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Ccdc17Q8CE13 Gm2274-201ENSMUST00000184539 609 ntBASIC18.15■□□□□ 0.5
Ccdc17Q8CE13 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.15■□□□□ 0.5
Ccdc17Q8CE13 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc17Q8CE13 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc17Q8CE13 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc17Q8CE13 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Ccdc17Q8CE13 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc17Q8CE13 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.14■□□□□ 0.5
Ccdc17Q8CE13 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.14■□□□□ 0.49
Ccdc17Q8CE13 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ccdc17Q8CE13 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Ccdc17Q8CE13 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms