Protein–RNA interactions for Protein: Q8BR37

Nhlrc1, E3 ubiquitin-protein ligase NHLRC1, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc1Q8BR37 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nhlrc1Q8BR37 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC13.66□□□□□ -0.22
Nhlrc1Q8BR37 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nhlrc1Q8BR37 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Nhlrc1Q8BR37 Gm43799-201ENSMUST00000201845 579 ntBASIC13.66□□□□□ -0.22
Nhlrc1Q8BR37 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nhlrc1Q8BR37 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC13.66□□□□□ -0.22
Nhlrc1Q8BR37 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nhlrc1Q8BR37 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nhlrc1Q8BR37 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Nhlrc1Q8BR37 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nhlrc1Q8BR37 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nhlrc1Q8BR37 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Nhlrc1Q8BR37 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nhlrc1Q8BR37 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nhlrc1Q8BR37 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nhlrc1Q8BR37 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nhlrc1Q8BR37 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nhlrc1Q8BR37 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nhlrc1Q8BR37 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nhlrc1Q8BR37 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nhlrc1Q8BR37 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nhlrc1Q8BR37 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nhlrc1Q8BR37 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nhlrc1Q8BR37 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nhlrc1Q8BR37 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nhlrc1Q8BR37 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nhlrc1Q8BR37 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC13.65□□□□□ -0.22
Nhlrc1Q8BR37 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nhlrc1Q8BR37 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nhlrc1Q8BR37 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Nhlrc1Q8BR37 Gm7856-201ENSMUST00000117514 1493 ntBASIC13.65□□□□□ -0.22
Nhlrc1Q8BR37 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Nhlrc1Q8BR37 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Nhlrc1Q8BR37 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.23
Nhlrc1Q8BR37 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Nhlrc1Q8BR37 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nhlrc1Q8BR37 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nhlrc1Q8BR37 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nhlrc1Q8BR37 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Nhlrc1Q8BR37 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nhlrc1Q8BR37 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nhlrc1Q8BR37 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nhlrc1Q8BR37 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC13.64□□□□□ -0.23
Nhlrc1Q8BR37 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nhlrc1Q8BR37 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nhlrc1Q8BR37 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC13.64□□□□□ -0.23
Nhlrc1Q8BR37 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nhlrc1Q8BR37 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nhlrc1Q8BR37 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nhlrc1Q8BR37 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nhlrc1Q8BR37 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nhlrc1Q8BR37 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nhlrc1Q8BR37 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Nhlrc1Q8BR37 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nhlrc1Q8BR37 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nhlrc1Q8BR37 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nhlrc1Q8BR37 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Nhlrc1Q8BR37 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nhlrc1Q8BR37 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC13.63□□□□□ -0.23
Nhlrc1Q8BR37 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nhlrc1Q8BR37 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC13.63□□□□□ -0.23
Nhlrc1Q8BR37 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nhlrc1Q8BR37 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nhlrc1Q8BR37 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Nhlrc1Q8BR37 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nhlrc1Q8BR37 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nhlrc1Q8BR37 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nhlrc1Q8BR37 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nhlrc1Q8BR37 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC13.63□□□□□ -0.23
Nhlrc1Q8BR37 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nhlrc1Q8BR37 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nhlrc1Q8BR37 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nhlrc1Q8BR37 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nhlrc1Q8BR37 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nhlrc1Q8BR37 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Nhlrc1Q8BR37 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC13.62□□□□□ -0.23
Nhlrc1Q8BR37 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nhlrc1Q8BR37 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nhlrc1Q8BR37 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nhlrc1Q8BR37 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nhlrc1Q8BR37 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Nhlrc1Q8BR37 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nhlrc1Q8BR37 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nhlrc1Q8BR37 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nhlrc1Q8BR37 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nhlrc1Q8BR37 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Nhlrc1Q8BR37 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nhlrc1Q8BR37 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nhlrc1Q8BR37 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nhlrc1Q8BR37 Gm45906-201ENSMUST00000208911 1430 ntBASIC13.62□□□□□ -0.23
Nhlrc1Q8BR37 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nhlrc1Q8BR37 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nhlrc1Q8BR37 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nhlrc1Q8BR37 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nhlrc1Q8BR37 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Nhlrc1Q8BR37 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nhlrc1Q8BR37 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nhlrc1Q8BR37 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nhlrc1Q8BR37 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms