Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Clrn3Q8BHH8 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clrn3Q8BHH8 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clrn3Q8BHH8 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Clrn3Q8BHH8 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.5■□□□□ 0.23
Clrn3Q8BHH8 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Clrn3Q8BHH8 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clrn3Q8BHH8 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clrn3Q8BHH8 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clrn3Q8BHH8 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.5■□□□□ 0.23
Clrn3Q8BHH8 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clrn3Q8BHH8 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clrn3Q8BHH8 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clrn3Q8BHH8 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Clrn3Q8BHH8 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Clrn3Q8BHH8 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Clrn3Q8BHH8 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Clrn3Q8BHH8 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Clrn3Q8BHH8 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Clrn3Q8BHH8 Gm11927-201ENSMUST00000118472 759 ntBASIC16.49■□□□□ 0.23
Clrn3Q8BHH8 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Clrn3Q8BHH8 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Clrn3Q8BHH8 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Clrn3Q8BHH8 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Clrn3Q8BHH8 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Clrn3Q8BHH8 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.49■□□□□ 0.23
Clrn3Q8BHH8 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Clrn3Q8BHH8 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Clrn3Q8BHH8 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.48■□□□□ 0.23
Clrn3Q8BHH8 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.48■□□□□ 0.23
Clrn3Q8BHH8 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Clrn3Q8BHH8 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Clrn3Q8BHH8 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Clrn3Q8BHH8 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Clrn3Q8BHH8 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.48■□□□□ 0.23
Clrn3Q8BHH8 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Clrn3Q8BHH8 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.48■□□□□ 0.23
Clrn3Q8BHH8 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Clrn3Q8BHH8 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Clrn3Q8BHH8 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.48■□□□□ 0.23
Clrn3Q8BHH8 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Clrn3Q8BHH8 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.48■□□□□ 0.23
Clrn3Q8BHH8 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Clrn3Q8BHH8 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Clrn3Q8BHH8 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.48■□□□□ 0.23
Clrn3Q8BHH8 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Clrn3Q8BHH8 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Clrn3Q8BHH8 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Clrn3Q8BHH8 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Clrn3Q8BHH8 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Clrn3Q8BHH8 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Clrn3Q8BHH8 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Clrn3Q8BHH8 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Clrn3Q8BHH8 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Clrn3Q8BHH8 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Clrn3Q8BHH8 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Clrn3Q8BHH8 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Clrn3Q8BHH8 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.47■□□□□ 0.23
Clrn3Q8BHH8 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Clrn3Q8BHH8 Gm12896-201ENSMUST00000118430 226 ntBASIC16.47■□□□□ 0.23
Clrn3Q8BHH8 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Clrn3Q8BHH8 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Clrn3Q8BHH8 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.47■□□□□ 0.23
Clrn3Q8BHH8 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Clrn3Q8BHH8 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Clrn3Q8BHH8 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
Clrn3Q8BHH8 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Clrn3Q8BHH8 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Clrn3Q8BHH8 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Clrn3Q8BHH8 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Clrn3Q8BHH8 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Clrn3Q8BHH8 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Clrn3Q8BHH8 Gm20049-201ENSMUST00000219950 730 ntBASIC16.46■□□□□ 0.23
Clrn3Q8BHH8 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Clrn3Q8BHH8 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Clrn3Q8BHH8 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.46■□□□□ 0.23
Clrn3Q8BHH8 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Clrn3Q8BHH8 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.46■□□□□ 0.23
Clrn3Q8BHH8 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Clrn3Q8BHH8 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
Clrn3Q8BHH8 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.46■□□□□ 0.22
Clrn3Q8BHH8 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Clrn3Q8BHH8 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Clrn3Q8BHH8 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clrn3Q8BHH8 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC16.45■□□□□ 0.22
Clrn3Q8BHH8 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clrn3Q8BHH8 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clrn3Q8BHH8 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Clrn3Q8BHH8 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Clrn3Q8BHH8 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clrn3Q8BHH8 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clrn3Q8BHH8 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clrn3Q8BHH8 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clrn3Q8BHH8 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Clrn3Q8BHH8 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clrn3Q8BHH8 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.45■□□□□ 0.22
Clrn3Q8BHH8 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clrn3Q8BHH8 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Clrn3Q8BHH8 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clrn3Q8BHH8 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms