Protein–RNA interactions for Protein: Q80T79

Csmd3, CUB and sushi domain-containing protein 3, mousemouse

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csmd3Q80T79 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Csmd3Q80T79 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Csmd3Q80T79 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Csmd3Q80T79 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Csmd3Q80T79 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Csmd3Q80T79 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Csmd3Q80T79 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Csmd3Q80T79 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Csmd3Q80T79 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC12.06□□□□□ -0.48
Csmd3Q80T79 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Csmd3Q80T79 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Csmd3Q80T79 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Csmd3Q80T79 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Csmd3Q80T79 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC12.06□□□□□ -0.48
Csmd3Q80T79 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Csmd3Q80T79 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC12.05□□□□□ -0.48
Csmd3Q80T79 Zkscan4-202ENSMUST00000225845 1506 ntBASIC12.05□□□□□ -0.48
Csmd3Q80T79 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Csmd3Q80T79 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Csmd3Q80T79 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Csmd3Q80T79 Gm26039-201ENSMUST00000158152 144 ntBASIC12.05□□□□□ -0.48
Csmd3Q80T79 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Csmd3Q80T79 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Csmd3Q80T79 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Csmd3Q80T79 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Csmd3Q80T79 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Csmd3Q80T79 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Csmd3Q80T79 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Csmd3Q80T79 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Csmd3Q80T79 Gm13401-201ENSMUST00000117074 291 ntBASIC12.05□□□□□ -0.48
Csmd3Q80T79 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Csmd3Q80T79 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Csmd3Q80T79 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Csmd3Q80T79 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Csmd3Q80T79 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Csmd3Q80T79 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC12.05□□□□□ -0.48
Csmd3Q80T79 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Csmd3Q80T79 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Csmd3Q80T79 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Csmd3Q80T79 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Csmd3Q80T79 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Csmd3Q80T79 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Csmd3Q80T79 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Csmd3Q80T79 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Csmd3Q80T79 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Csmd3Q80T79 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Csmd3Q80T79 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Csmd3Q80T79 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Csmd3Q80T79 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Csmd3Q80T79 Ighv6-1-201ENSMUST00000193612 343 ntBASIC12.04□□□□□ -0.48
Csmd3Q80T79 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC12.04□□□□□ -0.48
Csmd3Q80T79 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Csmd3Q80T79 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Csmd3Q80T79 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Csmd3Q80T79 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC12.04□□□□□ -0.48
Csmd3Q80T79 Gm37722-201ENSMUST00000193757 208 ntBASIC12.04□□□□□ -0.48
Csmd3Q80T79 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC12.04□□□□□ -0.48
Csmd3Q80T79 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Csmd3Q80T79 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Csmd3Q80T79 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Csmd3Q80T79 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Csmd3Q80T79 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Csmd3Q80T79 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC12.04□□□□□ -0.48
Csmd3Q80T79 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Csmd3Q80T79 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Csmd3Q80T79 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Csmd3Q80T79 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Csmd3Q80T79 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Csmd3Q80T79 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC12.03□□□□□ -0.48
Csmd3Q80T79 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC12.03□□□□□ -0.48
Csmd3Q80T79 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Csmd3Q80T79 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Csmd3Q80T79 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Csmd3Q80T79 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Csmd3Q80T79 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC12.03□□□□□ -0.48
Csmd3Q80T79 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Csmd3Q80T79 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Csmd3Q80T79 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Csmd3Q80T79 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Csmd3Q80T79 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC12.03□□□□□ -0.48
Csmd3Q80T79 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Csmd3Q80T79 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Csmd3Q80T79 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Csmd3Q80T79 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Csmd3Q80T79 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Csmd3Q80T79 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Csmd3Q80T79 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Csmd3Q80T79 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Csmd3Q80T79 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Csmd3Q80T79 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Csmd3Q80T79 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC12.02□□□□□ -0.48
Csmd3Q80T79 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Csmd3Q80T79 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Csmd3Q80T79 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Csmd3Q80T79 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Csmd3Q80T79 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Csmd3Q80T79 AC159301.1-201ENSMUST00000225130 1182 ntBASIC12.02□□□□□ -0.49
Csmd3Q80T79 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Csmd3Q80T79 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC12.02□□□□□ -0.49
Csmd3Q80T79 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms