Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx4Q7TNK1 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Rfx4Q7TNK1 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Rfx4Q7TNK1 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Rfx4Q7TNK1 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx4Q7TNK1 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx4Q7TNK1 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx4Q7TNK1 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx4Q7TNK1 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx4Q7TNK1 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx4Q7TNK1 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Rfx4Q7TNK1 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.91■□□□□ 0.3
Rfx4Q7TNK1 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx4Q7TNK1 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx4Q7TNK1 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx4Q7TNK1 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx4Q7TNK1 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx4Q7TNK1 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Rfx4Q7TNK1 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx4Q7TNK1 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Rfx4Q7TNK1 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.91■□□□□ 0.3
Rfx4Q7TNK1 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Rfx4Q7TNK1 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx4Q7TNK1 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx4Q7TNK1 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx4Q7TNK1 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx4Q7TNK1 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx4Q7TNK1 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfx4Q7TNK1 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfx4Q7TNK1 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfx4Q7TNK1 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfx4Q7TNK1 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rfx4Q7TNK1 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rfx4Q7TNK1 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Rfx4Q7TNK1 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfx4Q7TNK1 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Rfx4Q7TNK1 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Rfx4Q7TNK1 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rfx4Q7TNK1 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.9■□□□□ 0.3
Rfx4Q7TNK1 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfx4Q7TNK1 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfx4Q7TNK1 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfx4Q7TNK1 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfx4Q7TNK1 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.9■□□□□ 0.3
Rfx4Q7TNK1 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.9■□□□□ 0.3
Rfx4Q7TNK1 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Rfx4Q7TNK1 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Rfx4Q7TNK1 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.89■□□□□ 0.3
Rfx4Q7TNK1 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.3
Rfx4Q7TNK1 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Rfx4Q7TNK1 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rfx4Q7TNK1 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rfx4Q7TNK1 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rfx4Q7TNK1 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rfx4Q7TNK1 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rfx4Q7TNK1 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rfx4Q7TNK1 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.89■□□□□ 0.29
Rfx4Q7TNK1 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rfx4Q7TNK1 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.89■□□□□ 0.29
Rfx4Q7TNK1 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Rfx4Q7TNK1 Gm12821-201ENSMUST00000120022 600 ntBASIC16.89■□□□□ 0.29
Rfx4Q7TNK1 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rfx4Q7TNK1 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC16.89■□□□□ 0.29
Rfx4Q7TNK1 Gm40848-201ENSMUST00000221998 324 ntBASIC16.89■□□□□ 0.29
Rfx4Q7TNK1 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Rfx4Q7TNK1 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rfx4Q7TNK1 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.89■□□□□ 0.29
Rfx4Q7TNK1 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rfx4Q7TNK1 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rfx4Q7TNK1 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Rfx4Q7TNK1 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rfx4Q7TNK1 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Rfx4Q7TNK1 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rfx4Q7TNK1 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Rfx4Q7TNK1 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rfx4Q7TNK1 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rfx4Q7TNK1 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC16.88■□□□□ 0.29
Rfx4Q7TNK1 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Rfx4Q7TNK1 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC16.88■□□□□ 0.29
Rfx4Q7TNK1 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC16.88■□□□□ 0.29
Rfx4Q7TNK1 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Rfx4Q7TNK1 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rfx4Q7TNK1 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rfx4Q7TNK1 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rfx4Q7TNK1 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rfx4Q7TNK1 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rfx4Q7TNK1 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rfx4Q7TNK1 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rfx4Q7TNK1 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rfx4Q7TNK1 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.87■□□□□ 0.29
Rfx4Q7TNK1 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rfx4Q7TNK1 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rfx4Q7TNK1 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rfx4Q7TNK1 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rfx4Q7TNK1 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rfx4Q7TNK1 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rfx4Q7TNK1 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Rfx4Q7TNK1 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.87■□□□□ 0.29
Rfx4Q7TNK1 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rfx4Q7TNK1 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms