Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cspg5Q71M36 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cspg5Q71M36 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cspg5Q71M36 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cspg5Q71M36 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cspg5Q71M36 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cspg5Q71M36 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cspg5Q71M36 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cspg5Q71M36 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cspg5Q71M36 Gm21814-202ENSMUST00000203277 873 ntBASIC18.2■□□□□ 0.5
Cspg5Q71M36 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Cspg5Q71M36 AC159205.6-201ENSMUST00000224935 887 ntBASIC18.2■□□□□ 0.5
Cspg5Q71M36 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cspg5Q71M36 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cspg5Q71M36 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.2■□□□□ 0.5
Cspg5Q71M36 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cspg5Q71M36 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cspg5Q71M36 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cspg5Q71M36 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cspg5Q71M36 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
Cspg5Q71M36 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cspg5Q71M36 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cspg5Q71M36 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.2■□□□□ 0.5
Cspg5Q71M36 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
Cspg5Q71M36 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cspg5Q71M36 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.19■□□□□ 0.5
Cspg5Q71M36 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cspg5Q71M36 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cspg5Q71M36 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cspg5Q71M36 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cspg5Q71M36 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cspg5Q71M36 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.19■□□□□ 0.5
Cspg5Q71M36 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Cspg5Q71M36 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.19■□□□□ 0.5
Cspg5Q71M36 Gm6659-201ENSMUST00000174752 547 ntBASIC18.19■□□□□ 0.5
Cspg5Q71M36 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Cspg5Q71M36 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cspg5Q71M36 Timm23-208ENSMUST00000226683 750 ntBASIC18.19■□□□□ 0.5
Cspg5Q71M36 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cspg5Q71M36 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Cspg5Q71M36 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cspg5Q71M36 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cspg5Q71M36 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Cspg5Q71M36 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cspg5Q71M36 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cspg5Q71M36 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cspg5Q71M36 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cspg5Q71M36 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cspg5Q71M36 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Cspg5Q71M36 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cspg5Q71M36 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Cspg5Q71M36 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cspg5Q71M36 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Cspg5Q71M36 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC18.18■□□□□ 0.5
Cspg5Q71M36 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.18■□□□□ 0.5
Cspg5Q71M36 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cspg5Q71M36 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cspg5Q71M36 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cspg5Q71M36 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
Cspg5Q71M36 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.18■□□□□ 0.5
Cspg5Q71M36 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cspg5Q71M36 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cspg5Q71M36 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cspg5Q71M36 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cspg5Q71M36 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cspg5Q71M36 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Cspg5Q71M36 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cspg5Q71M36 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cspg5Q71M36 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cspg5Q71M36 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.17■□□□□ 0.5
Cspg5Q71M36 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cspg5Q71M36 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cspg5Q71M36 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cspg5Q71M36 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cspg5Q71M36 Gm3375-201ENSMUST00000203929 796 ntBASIC18.17■□□□□ 0.5
Cspg5Q71M36 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.17■□□□□ 0.5
Cspg5Q71M36 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cspg5Q71M36 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.17■□□□□ 0.5
Cspg5Q71M36 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cspg5Q71M36 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cspg5Q71M36 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cspg5Q71M36 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cspg5Q71M36 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cspg5Q71M36 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cspg5Q71M36 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Cspg5Q71M36 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Cspg5Q71M36 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cspg5Q71M36 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cspg5Q71M36 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cspg5Q71M36 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cspg5Q71M36 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Cspg5Q71M36 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.16■□□□□ 0.5
Cspg5Q71M36 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.16■□□□□ 0.5
Cspg5Q71M36 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC18.16■□□□□ 0.5
Cspg5Q71M36 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cspg5Q71M36 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cspg5Q71M36 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cspg5Q71M36 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Cspg5Q71M36 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cspg5Q71M36 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms