Protein–RNA interactions for Protein: Q6XAS3

Ssx9, MCG116991, isoform CRA_b, mousemouse

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx9Q6XAS3 Gm10418-201ENSMUST00000100943 576 ntBASIC17.53■□□□□ 0.4
Ssx9Q6XAS3 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.53■□□□□ 0.4
Ssx9Q6XAS3 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ssx9Q6XAS3 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ssx9Q6XAS3 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ssx9Q6XAS3 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ssx9Q6XAS3 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ssx9Q6XAS3 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ssx9Q6XAS3 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ssx9Q6XAS3 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ssx9Q6XAS3 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ssx9Q6XAS3 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ssx9Q6XAS3 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ssx9Q6XAS3 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Ssx9Q6XAS3 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
Ssx9Q6XAS3 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Ssx9Q6XAS3 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ssx9Q6XAS3 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ssx9Q6XAS3 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ssx9Q6XAS3 Mir2861-201ENSMUST00000175539 82 ntBASIC17.52■□□□□ 0.4
Ssx9Q6XAS3 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ssx9Q6XAS3 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ssx9Q6XAS3 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Ssx9Q6XAS3 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ssx9Q6XAS3 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.52■□□□□ 0.4
Ssx9Q6XAS3 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Ssx9Q6XAS3 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.52■□□□□ 0.39
Ssx9Q6XAS3 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.52■□□□□ 0.39
Ssx9Q6XAS3 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ssx9Q6XAS3 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ssx9Q6XAS3 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ssx9Q6XAS3 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ssx9Q6XAS3 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ssx9Q6XAS3 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Ssx9Q6XAS3 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.51■□□□□ 0.39
Ssx9Q6XAS3 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ssx9Q6XAS3 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ssx9Q6XAS3 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ssx9Q6XAS3 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ssx9Q6XAS3 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.51■□□□□ 0.39
Ssx9Q6XAS3 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.51■□□□□ 0.39
Ssx9Q6XAS3 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ssx9Q6XAS3 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ssx9Q6XAS3 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Ssx9Q6XAS3 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ssx9Q6XAS3 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ssx9Q6XAS3 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ssx9Q6XAS3 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ssx9Q6XAS3 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ssx9Q6XAS3 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ssx9Q6XAS3 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Ssx9Q6XAS3 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Ssx9Q6XAS3 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ssx9Q6XAS3 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Ssx9Q6XAS3 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ssx9Q6XAS3 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Ssx9Q6XAS3 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ssx9Q6XAS3 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.5■□□□□ 0.39
Ssx9Q6XAS3 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.5■□□□□ 0.39
Ssx9Q6XAS3 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Ssx9Q6XAS3 Mtag2-201ENSMUST00000058665 714 ntBASIC17.5■□□□□ 0.39
Ssx9Q6XAS3 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ssx9Q6XAS3 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.5■□□□□ 0.39
Ssx9Q6XAS3 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ssx9Q6XAS3 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ssx9Q6XAS3 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ssx9Q6XAS3 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ssx9Q6XAS3 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ssx9Q6XAS3 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ssx9Q6XAS3 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.49■□□□□ 0.39
Ssx9Q6XAS3 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.49■□□□□ 0.39
Ssx9Q6XAS3 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ssx9Q6XAS3 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ssx9Q6XAS3 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.49■□□□□ 0.39
Ssx9Q6XAS3 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.49■□□□□ 0.39
Ssx9Q6XAS3 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Ssx9Q6XAS3 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ssx9Q6XAS3 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.49■□□□□ 0.39
Ssx9Q6XAS3 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ssx9Q6XAS3 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ssx9Q6XAS3 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ssx9Q6XAS3 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ssx9Q6XAS3 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ssx9Q6XAS3 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ssx9Q6XAS3 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ssx9Q6XAS3 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ssx9Q6XAS3 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ssx9Q6XAS3 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.49■□□□□ 0.39
Ssx9Q6XAS3 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ssx9Q6XAS3 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Ssx9Q6XAS3 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Ssx9Q6XAS3 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ssx9Q6XAS3 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Ssx9Q6XAS3 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ssx9Q6XAS3 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ssx9Q6XAS3 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ssx9Q6XAS3 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ssx9Q6XAS3 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ssx9Q6XAS3 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ssx9Q6XAS3 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms