Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Casc4Q6P2L7 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Casc4Q6P2L7 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Casc4Q6P2L7 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Casc4Q6P2L7 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Casc4Q6P2L7 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Casc4Q6P2L7 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Casc4Q6P2L7 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Casc4Q6P2L7 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Casc4Q6P2L7 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Casc4Q6P2L7 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.78■□□□□ 0.44
Casc4Q6P2L7 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Casc4Q6P2L7 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.78■□□□□ 0.44
Casc4Q6P2L7 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.78■□□□□ 0.44
Casc4Q6P2L7 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.78■□□□□ 0.44
Casc4Q6P2L7 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Casc4Q6P2L7 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Casc4Q6P2L7 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Casc4Q6P2L7 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Casc4Q6P2L7 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Casc4Q6P2L7 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Casc4Q6P2L7 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Casc4Q6P2L7 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Casc4Q6P2L7 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Casc4Q6P2L7 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Casc4Q6P2L7 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Casc4Q6P2L7 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Casc4Q6P2L7 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Casc4Q6P2L7 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Casc4Q6P2L7 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Casc4Q6P2L7 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.77■□□□□ 0.44
Casc4Q6P2L7 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Casc4Q6P2L7 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Casc4Q6P2L7 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Casc4Q6P2L7 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Casc4Q6P2L7 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Casc4Q6P2L7 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.77■□□□□ 0.44
Casc4Q6P2L7 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Casc4Q6P2L7 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.77■□□□□ 0.44
Casc4Q6P2L7 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Casc4Q6P2L7 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Casc4Q6P2L7 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Casc4Q6P2L7 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.76■□□□□ 0.43
Casc4Q6P2L7 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Casc4Q6P2L7 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Casc4Q6P2L7 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.76■□□□□ 0.43
Casc4Q6P2L7 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Casc4Q6P2L7 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Casc4Q6P2L7 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.76■□□□□ 0.43
Casc4Q6P2L7 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Casc4Q6P2L7 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Casc4Q6P2L7 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.76■□□□□ 0.43
Casc4Q6P2L7 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.76■□□□□ 0.43
Casc4Q6P2L7 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Casc4Q6P2L7 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Casc4Q6P2L7 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Casc4Q6P2L7 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Casc4Q6P2L7 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Casc4Q6P2L7 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Casc4Q6P2L7 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Casc4Q6P2L7 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Casc4Q6P2L7 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Casc4Q6P2L7 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Casc4Q6P2L7 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Casc4Q6P2L7 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Casc4Q6P2L7 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.75■□□□□ 0.43
Casc4Q6P2L7 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Casc4Q6P2L7 Gm15378-201ENSMUST00000121894 207 ntBASIC17.75■□□□□ 0.43
Casc4Q6P2L7 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Casc4Q6P2L7 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Casc4Q6P2L7 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Casc4Q6P2L7 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Casc4Q6P2L7 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Casc4Q6P2L7 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Casc4Q6P2L7 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Casc4Q6P2L7 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Casc4Q6P2L7 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Casc4Q6P2L7 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Casc4Q6P2L7 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Casc4Q6P2L7 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Casc4Q6P2L7 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.74■□□□□ 0.43
Casc4Q6P2L7 Mir2861-201ENSMUST00000175539 82 ntBASIC17.74■□□□□ 0.43
Casc4Q6P2L7 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Casc4Q6P2L7 Gm10698-201ENSMUST00000182663 604 ntBASIC17.74■□□□□ 0.43
Casc4Q6P2L7 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.74■□□□□ 0.43
Casc4Q6P2L7 Gm42545-201ENSMUST00000202755 922 ntBASIC17.74■□□□□ 0.43
Casc4Q6P2L7 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Casc4Q6P2L7 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Casc4Q6P2L7 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Casc4Q6P2L7 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Casc4Q6P2L7 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Casc4Q6P2L7 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Casc4Q6P2L7 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Casc4Q6P2L7 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Casc4Q6P2L7 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Casc4Q6P2L7 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Casc4Q6P2L7 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.73■□□□□ 0.43
Casc4Q6P2L7 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.73■□□□□ 0.43
Casc4Q6P2L7 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Casc4Q6P2L7 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms