Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Trav6d-4Q5R1I0 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6d-4Q5R1I0 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6d-4Q5R1I0 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
Trav6d-4Q5R1I0 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trav6d-4Q5R1I0 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6d-4Q5R1I0 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6d-4Q5R1I0 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6d-4Q5R1I0 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6d-4Q5R1I0 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6d-4Q5R1I0 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6d-4Q5R1I0 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6d-4Q5R1I0 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Trav6d-4Q5R1I0 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6d-4Q5R1I0 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6d-4Q5R1I0 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6d-4Q5R1I0 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6d-4Q5R1I0 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6d-4Q5R1I0 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6d-4Q5R1I0 Gm15565-201ENSMUST00000118890 427 ntBASIC14.79□□□□□ -0.04
Trav6d-4Q5R1I0 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6d-4Q5R1I0 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6d-4Q5R1I0 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC14.79□□□□□ -0.04
Trav6d-4Q5R1I0 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC14.79□□□□□ -0.04
Trav6d-4Q5R1I0 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6d-4Q5R1I0 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC14.79□□□□□ -0.04
Trav6d-4Q5R1I0 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6d-4Q5R1I0 Otx2os1-204ENSMUST00000227221 751 ntBASIC14.79□□□□□ -0.04
Trav6d-4Q5R1I0 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6d-4Q5R1I0 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6d-4Q5R1I0 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6d-4Q5R1I0 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6d-4Q5R1I0 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6d-4Q5R1I0 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6d-4Q5R1I0 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6d-4Q5R1I0 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Trav6d-4Q5R1I0 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Trav6d-4Q5R1I0 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6d-4Q5R1I0 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6d-4Q5R1I0 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6d-4Q5R1I0 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6d-4Q5R1I0 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6d-4Q5R1I0 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6d-4Q5R1I0 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6d-4Q5R1I0 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6d-4Q5R1I0 Gm12085-201ENSMUST00000119263 940 ntBASIC14.78□□□□□ -0.04
Trav6d-4Q5R1I0 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6d-4Q5R1I0 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6d-4Q5R1I0 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6d-4Q5R1I0 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC14.78□□□□□ -0.04
Trav6d-4Q5R1I0 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC14.78□□□□□ -0.04
Trav6d-4Q5R1I0 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6d-4Q5R1I0 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC14.78□□□□□ -0.04
Trav6d-4Q5R1I0 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6d-4Q5R1I0 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6d-4Q5R1I0 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6d-4Q5R1I0 Gm45141-201ENSMUST00000206502 1888 ntBASIC14.78□□□□□ -0.04
Trav6d-4Q5R1I0 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6d-4Q5R1I0 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6d-4Q5R1I0 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6d-4Q5R1I0 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6d-4Q5R1I0 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav6d-4Q5R1I0 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trav6d-4Q5R1I0 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trav6d-4Q5R1I0 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav6d-4Q5R1I0 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trav6d-4Q5R1I0 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav6d-4Q5R1I0 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav6d-4Q5R1I0 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav6d-4Q5R1I0 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav6d-4Q5R1I0 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC14.77□□□□□ -0.05
Trav6d-4Q5R1I0 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC14.77□□□□□ -0.05
Trav6d-4Q5R1I0 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trav6d-4Q5R1I0 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC14.77□□□□□ -0.05
Trav6d-4Q5R1I0 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav6d-4Q5R1I0 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trav6d-4Q5R1I0 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav6d-4Q5R1I0 Idnk-204ENSMUST00000226010 1898 ntBASIC14.77□□□□□ -0.05
Trav6d-4Q5R1I0 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trav6d-4Q5R1I0 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav6d-4Q5R1I0 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav6d-4Q5R1I0 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6d-4Q5R1I0 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
Trav6d-4Q5R1I0 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6d-4Q5R1I0 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC14.76□□□□□ -0.05
Trav6d-4Q5R1I0 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6d-4Q5R1I0 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6d-4Q5R1I0 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6d-4Q5R1I0 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6d-4Q5R1I0 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6d-4Q5R1I0 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Trav6d-4Q5R1I0 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Trav6d-4Q5R1I0 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC14.76□□□□□ -0.05
Trav6d-4Q5R1I0 Krtap5-1-202ENSMUST00000188274 742 ntBASIC14.76□□□□□ -0.05
Trav6d-4Q5R1I0 Gm3375-201ENSMUST00000203929 796 ntBASIC14.76□□□□□ -0.05
Trav6d-4Q5R1I0 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6d-4Q5R1I0 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Trav6d-4Q5R1I0 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6d-4Q5R1I0 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Trav6d-4Q5R1I0 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms