Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Col5a2Q3U962 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC20.91■□□□□ 0.94
Col5a2Q3U962 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Col5a2Q3U962 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Col5a2Q3U962 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Col5a2Q3U962 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC20.91■□□□□ 0.94
Col5a2Q3U962 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
Col5a2Q3U962 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Col5a2Q3U962 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Col5a2Q3U962 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Col5a2Q3U962 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Col5a2Q3U962 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC20.9■□□□□ 0.94
Col5a2Q3U962 Gm27525-201ENSMUST00000184465 107 ntBASIC20.9■□□□□ 0.94
Col5a2Q3U962 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Col5a2Q3U962 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
Col5a2Q3U962 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Col5a2Q3U962 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
Col5a2Q3U962 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Col5a2Q3U962 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Col5a2Q3U962 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Col5a2Q3U962 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Col5a2Q3U962 Gm5864-201ENSMUST00000202263 970 ntBASIC20.89■□□□□ 0.94
Col5a2Q3U962 AC153889.1-201ENSMUST00000219257 330 ntBASIC20.89■□□□□ 0.94
Col5a2Q3U962 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Col5a2Q3U962 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Col5a2Q3U962 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
Col5a2Q3U962 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Col5a2Q3U962 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
Col5a2Q3U962 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Col5a2Q3U962 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col5a2Q3U962 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col5a2Q3U962 Gm43213-201ENSMUST00000151866 1790 ntBASIC20.88■□□□□ 0.93
Col5a2Q3U962 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Col5a2Q3U962 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col5a2Q3U962 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col5a2Q3U962 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col5a2Q3U962 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Col5a2Q3U962 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col5a2Q3U962 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col5a2Q3U962 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col5a2Q3U962 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Col5a2Q3U962 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col5a2Q3U962 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col5a2Q3U962 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col5a2Q3U962 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col5a2Q3U962 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col5a2Q3U962 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col5a2Q3U962 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col5a2Q3U962 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Col5a2Q3U962 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC20.87■□□□□ 0.93
Col5a2Q3U962 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC20.87■□□□□ 0.93
Col5a2Q3U962 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col5a2Q3U962 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Col5a2Q3U962 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col5a2Q3U962 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col5a2Q3U962 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.86■□□□□ 0.93
Col5a2Q3U962 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col5a2Q3U962 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC20.86■□□□□ 0.93
Col5a2Q3U962 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col5a2Q3U962 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Col5a2Q3U962 Notumos-201ENSMUST00000151998 2659 ntBASIC20.86■□□□□ 0.93
Col5a2Q3U962 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col5a2Q3U962 Gm12895-201ENSMUST00000122214 226 ntBASIC20.86■□□□□ 0.93
Col5a2Q3U962 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC20.86■□□□□ 0.93
Col5a2Q3U962 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC20.86■□□□□ 0.93
Col5a2Q3U962 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Col5a2Q3U962 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Col5a2Q3U962 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col5a2Q3U962 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col5a2Q3U962 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col5a2Q3U962 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col5a2Q3U962 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC20.85■□□□□ 0.93
Col5a2Q3U962 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Col5a2Q3U962 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC20.85■□□□□ 0.93
Col5a2Q3U962 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Col5a2Q3U962 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
Col5a2Q3U962 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC20.85■□□□□ 0.93
Col5a2Q3U962 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC20.85■□□□□ 0.93
Col5a2Q3U962 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC20.85■□□□□ 0.93
Col5a2Q3U962 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Col5a2Q3U962 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC20.85■□□□□ 0.93
Col5a2Q3U962 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Col5a2Q3U962 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Col5a2Q3U962 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col5a2Q3U962 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col5a2Q3U962 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col5a2Q3U962 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Col5a2Q3U962 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col5a2Q3U962 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Col5a2Q3U962 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Col5a2Q3U962 Gm43073-201ENSMUST00000198200 1189 ntBASIC20.84■□□□□ 0.93
Col5a2Q3U962 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC20.84■□□□□ 0.93
Col5a2Q3U962 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col5a2Q3U962 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col5a2Q3U962 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Col5a2Q3U962 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Col5a2Q3U962 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Col5a2Q3U962 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Col5a2Q3U962 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
Col5a2Q3U962 Gm43347-201ENSMUST00000200226 580 ntBASIC20.83■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms