Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Abca1P41233 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC14.57□□□□□ -0.08
Abca1P41233 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Abca1P41233 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Abca1P41233 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Abca1P41233 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Abca1P41233 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Abca1P41233 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Abca1P41233 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Abca1P41233 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Abca1P41233 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC14.56□□□□□ -0.08
Abca1P41233 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Abca1P41233 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
Abca1P41233 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Abca1P41233 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC14.56□□□□□ -0.08
Abca1P41233 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Abca1P41233 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Abca1P41233 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Abca1P41233 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Abca1P41233 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Abca1P41233 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Abca1P41233 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Abca1P41233 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC14.55□□□□□ -0.08
Abca1P41233 AC154471.1-201ENSMUST00000224418 436 ntBASIC14.55□□□□□ -0.08
Abca1P41233 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Abca1P41233 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Abca1P41233 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Abca1P41233 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Abca1P41233 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Abca1P41233 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Abca1P41233 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Abca1P41233 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC14.55□□□□□ -0.08
Abca1P41233 AC124603.1-201ENSMUST00000223843 308 ntBASIC14.55□□□□□ -0.08
Abca1P41233 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Abca1P41233 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Abca1P41233 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Abca1P41233 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Abca1P41233 Gm15853-202ENSMUST00000195518 2041 ntBASIC14.55□□□□□ -0.08
Abca1P41233 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Abca1P41233 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Abca1P41233 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.55□□□□□ -0.08
Abca1P41233 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Abca1P41233 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Abca1P41233 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Abca1P41233 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Abca1P41233 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Abca1P41233 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Abca1P41233 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC14.54□□□□□ -0.08
Abca1P41233 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Abca1P41233 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC14.54□□□□□ -0.08
Abca1P41233 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Abca1P41233 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Abca1P41233 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Abca1P41233 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Abca1P41233 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Abca1P41233 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Abca1P41233 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC14.54□□□□□ -0.08
Abca1P41233 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Abca1P41233 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Abca1P41233 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Abca1P41233 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Abca1P41233 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Abca1P41233 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Abca1P41233 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Abca1P41233 Gm10654-201ENSMUST00000098653 1633 ntBASIC14.53□□□□□ -0.08
Abca1P41233 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Abca1P41233 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Abca1P41233 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Abca1P41233 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
Abca1P41233 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Abca1P41233 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Abca1P41233 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Abca1P41233 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Abca1P41233 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Abca1P41233 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Abca1P41233 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Abca1P41233 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC14.53□□□□□ -0.08
Abca1P41233 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Abca1P41233 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Abca1P41233 Gm33142-201ENSMUST00000193913 867 ntBASIC14.53□□□□□ -0.08
Abca1P41233 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Abca1P41233 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
Abca1P41233 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Abca1P41233 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Abca1P41233 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Abca1P41233 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Abca1P41233 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Abca1P41233 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Abca1P41233 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Abca1P41233 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Abca1P41233 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Abca1P41233 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Abca1P41233 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC14.52□□□□□ -0.08
Abca1P41233 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC14.52□□□□□ -0.08
Abca1P41233 Gm38285-201ENSMUST00000192928 922 ntBASIC14.52□□□□□ -0.08
Abca1P41233 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
Abca1P41233 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Abca1P41233 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Abca1P41233 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Abca1P41233 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms