Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Mmp3P28862 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Mmp3P28862 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
Mmp3P28862 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Mmp3P28862 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.85■□□□□ 0.61
Mmp3P28862 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Mmp3P28862 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Mmp3P28862 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Mmp3P28862 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Mmp3P28862 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Mmp3P28862 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Mmp3P28862 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Mmp3P28862 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.84■□□□□ 0.61
Mmp3P28862 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Mmp3P28862 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Mmp3P28862 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Mmp3P28862 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Mmp3P28862 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Mmp3P28862 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Mmp3P28862 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Mmp3P28862 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Mmp3P28862 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Mmp3P28862 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Mmp3P28862 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Mmp3P28862 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Mmp3P28862 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Mmp3P28862 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Mmp3P28862 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
Mmp3P28862 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
Mmp3P28862 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Mmp3P28862 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Mmp3P28862 Gm16061-201ENSMUST00000122167 857 ntBASIC18.83■□□□□ 0.6
Mmp3P28862 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.83■□□□□ 0.6
Mmp3P28862 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Mmp3P28862 Gm23634-201ENSMUST00000175071 91 ntBASIC18.83■□□□□ 0.6
Mmp3P28862 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.83■□□□□ 0.6
Mmp3P28862 Gm37025-201ENSMUST00000195159 829 ntBASIC18.83■□□□□ 0.6
Mmp3P28862 Gm9731-201ENSMUST00000209480 747 ntBASIC18.83■□□□□ 0.6
Mmp3P28862 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Mmp3P28862 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Mmp3P28862 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
Mmp3P28862 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Mmp3P28862 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Mmp3P28862 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Mmp3P28862 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Mmp3P28862 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Mmp3P28862 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
Mmp3P28862 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.82■□□□□ 0.6
Mmp3P28862 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Mmp3P28862 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Mmp3P28862 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Mmp3P28862 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mmp3P28862 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mmp3P28862 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Mmp3P28862 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
Mmp3P28862 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Mmp3P28862 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.82■□□□□ 0.6
Mmp3P28862 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
Mmp3P28862 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mmp3P28862 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Mmp3P28862 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mmp3P28862 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mmp3P28862 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Mmp3P28862 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mmp3P28862 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.81■□□□□ 0.6
Mmp3P28862 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Mmp3P28862 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mmp3P28862 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC18.81■□□□□ 0.6
Mmp3P28862 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC18.81■□□□□ 0.6
Mmp3P28862 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mmp3P28862 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mmp3P28862 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Mmp3P28862 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mmp3P28862 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mmp3P28862 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Mmp3P28862 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mmp3P28862 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mmp3P28862 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mmp3P28862 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mmp3P28862 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mmp3P28862 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Mmp3P28862 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mmp3P28862 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Mmp3P28862 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mmp3P28862 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mmp3P28862 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mmp3P28862 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.8■□□□□ 0.6
Mmp3P28862 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Mmp3P28862 Gm22697-201ENSMUST00000175194 63 ntBASIC18.8■□□□□ 0.6
Mmp3P28862 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.8■□□□□ 0.6
Mmp3P28862 Gm18101-201ENSMUST00000215769 548 ntBASIC18.8■□□□□ 0.6
Mmp3P28862 Gm7370-201ENSMUST00000219471 767 ntBASIC18.8■□□□□ 0.6
Mmp3P28862 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mmp3P28862 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mmp3P28862 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.8■□□□□ 0.6
Mmp3P28862 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mmp3P28862 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mmp3P28862 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.8■□□□□ 0.6
Mmp3P28862 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Mmp3P28862 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms