Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nckap1P28660 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nckap1P28660 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.5■□□□□ 0.39
Nckap1P28660 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nckap1P28660 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nckap1P28660 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nckap1P28660 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nckap1P28660 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nckap1P28660 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Nckap1P28660 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nckap1P28660 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nckap1P28660 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.5■□□□□ 0.39
Nckap1P28660 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nckap1P28660 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nckap1P28660 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nckap1P28660 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nckap1P28660 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Nckap1P28660 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Nckap1P28660 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nckap1P28660 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Nckap1P28660 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nckap1P28660 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.49■□□□□ 0.39
Nckap1P28660 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Nckap1P28660 Gm2274-201ENSMUST00000184539 609 ntBASIC17.49■□□□□ 0.39
Nckap1P28660 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nckap1P28660 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nckap1P28660 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Nckap1P28660 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.49■□□□□ 0.39
Nckap1P28660 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nckap1P28660 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Nckap1P28660 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nckap1P28660 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Nckap1P28660 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nckap1P28660 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nckap1P28660 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Nckap1P28660 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.48■□□□□ 0.39
Nckap1P28660 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Nckap1P28660 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Nckap1P28660 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Nckap1P28660 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nckap1P28660 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nckap1P28660 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.48■□□□□ 0.39
Nckap1P28660 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nckap1P28660 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nckap1P28660 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.47■□□□□ 0.39
Nckap1P28660 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nckap1P28660 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Nckap1P28660 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Nckap1P28660 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nckap1P28660 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nckap1P28660 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nckap1P28660 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nckap1P28660 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nckap1P28660 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nckap1P28660 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nckap1P28660 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nckap1P28660 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Nckap1P28660 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Nckap1P28660 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.46■□□□□ 0.39
Nckap1P28660 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.46■□□□□ 0.39
Nckap1P28660 Gm29791-202ENSMUST00000207888 369 ntBASIC17.46■□□□□ 0.39
Nckap1P28660 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Nckap1P28660 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Nckap1P28660 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.46■□□□□ 0.39
Nckap1P28660 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.46■□□□□ 0.39
Nckap1P28660 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nckap1P28660 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nckap1P28660 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Nckap1P28660 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Nckap1P28660 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
Nckap1P28660 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Nckap1P28660 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nckap1P28660 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nckap1P28660 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nckap1P28660 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Nckap1P28660 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nckap1P28660 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
Nckap1P28660 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Nckap1P28660 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.45■□□□□ 0.38
Nckap1P28660 Gm45058-201ENSMUST00000205810 766 ntBASIC17.45■□□□□ 0.38
Nckap1P28660 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nckap1P28660 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nckap1P28660 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nckap1P28660 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nckap1P28660 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Nckap1P28660 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nckap1P28660 Golph3-205ENSMUST00000228671 2842 ntBASIC17.44■□□□□ 0.38
Nckap1P28660 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Nckap1P28660 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.44■□□□□ 0.38
Nckap1P28660 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nckap1P28660 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.44■□□□□ 0.38
Nckap1P28660 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Nckap1P28660 Mir5130-201ENSMUST00000175160 84 ntBASIC17.44■□□□□ 0.38
Nckap1P28660 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Nckap1P28660 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.44■□□□□ 0.38
Nckap1P28660 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.44■□□□□ 0.38
Nckap1P28660 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nckap1P28660 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nckap1P28660 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Nckap1P28660 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 95 ms