Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TcraP01849 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TcraP01849 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TcraP01849 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TcraP01849 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TcraP01849 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TcraP01849 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TcraP01849 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TcraP01849 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TcraP01849 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TcraP01849 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TcraP01849 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
TcraP01849 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
TcraP01849 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
TcraP01849 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TcraP01849 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TcraP01849 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TcraP01849 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
TcraP01849 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
TcraP01849 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TcraP01849 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TcraP01849 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TcraP01849 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
TcraP01849 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TcraP01849 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TcraP01849 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TcraP01849 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TcraP01849 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC12.87□□□□□ -0.35
TcraP01849 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TcraP01849 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TcraP01849 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
TcraP01849 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TcraP01849 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TcraP01849 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
TcraP01849 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
TcraP01849 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TcraP01849 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TcraP01849 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC12.86□□□□□ -0.35
TcraP01849 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TcraP01849 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TcraP01849 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TcraP01849 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TcraP01849 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TcraP01849 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TcraP01849 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
TcraP01849 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TcraP01849 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC12.86□□□□□ -0.35
TcraP01849 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TcraP01849 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TcraP01849 Gm43808-201ENSMUST00000202534 2065 ntBASIC12.86□□□□□ -0.35
TcraP01849 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC12.86□□□□□ -0.35
TcraP01849 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TcraP01849 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TcraP01849 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
TcraP01849 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
TcraP01849 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
TcraP01849 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TcraP01849 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TcraP01849 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TcraP01849 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TcraP01849 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TcraP01849 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TcraP01849 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TcraP01849 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
TcraP01849 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
TcraP01849 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
TcraP01849 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC12.85□□□□□ -0.35
TcraP01849 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
TcraP01849 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TcraP01849 Gm45774-201ENSMUST00000211992 2665 ntBASIC12.85□□□□□ -0.35
TcraP01849 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
TcraP01849 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TcraP01849 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TcraP01849 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC12.85□□□□□ -0.35
TcraP01849 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TcraP01849 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TcraP01849 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TcraP01849 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
TcraP01849 Gm37812-201ENSMUST00000195216 2475 ntBASIC12.85□□□□□ -0.35
TcraP01849 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TcraP01849 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TcraP01849 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TcraP01849 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TcraP01849 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TcraP01849 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TcraP01849 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
TcraP01849 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TcraP01849 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TcraP01849 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
TcraP01849 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
TcraP01849 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
TcraP01849 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TcraP01849 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC12.84□□□□□ -0.35
TcraP01849 Haglr-201ENSMUST00000100000 2085 ntBASIC12.84□□□□□ -0.35
TcraP01849 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
TcraP01849 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TcraP01849 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TcraP01849 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TcraP01849 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
TcraP01849 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms