Protein–RNA interactions for Protein: P01739

T-cell receptor alpha chain V region 2B4, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01739 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
P01739 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
P01739 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
P01739 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
P01739 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
P01739 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
P01739 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC13.24□□□□□ -0.29
P01739 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
P01739 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC13.24□□□□□ -0.29
P01739 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
P01739 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
P01739 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
P01739 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
P01739 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
P01739 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC13.24□□□□□ -0.29
P01739 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
P01739 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
P01739 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
P01739 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
P01739 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
P01739 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
P01739 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
P01739 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
P01739 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
P01739 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
P01739 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
P01739 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
P01739 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
P01739 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P01739 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
P01739 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
P01739 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
P01739 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
P01739 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P01739 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
P01739 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
P01739 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P01739 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P01739 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P01739 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P01739 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P01739 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P01739 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P01739 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P01739 Gm12933-201ENSMUST00000120203 872 ntBASIC13.23□□□□□ -0.29
P01739 Gm37179-201ENSMUST00000194862 823 ntBASIC13.23□□□□□ -0.29
P01739 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
P01739 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC13.23□□□□□ -0.29
P01739 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
P01739 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P01739 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
P01739 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
P01739 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P01739 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P01739 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC13.23□□□□□ -0.29
P01739 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
P01739 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P01739 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
P01739 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P01739 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
P01739 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P01739 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P01739 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
P01739 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
P01739 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
P01739 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
P01739 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P01739 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC13.22□□□□□ -0.29
P01739 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
P01739 Gm5408-201ENSMUST00000197998 747 ntBASIC13.22□□□□□ -0.29
P01739 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC13.22□□□□□ -0.29
P01739 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P01739 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
P01739 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
P01739 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P01739 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P01739 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
P01739 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P01739 AC108858.1-201ENSMUST00000228461 1498 ntBASIC13.22□□□□□ -0.29
P01739 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
P01739 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
P01739 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
P01739 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P01739 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC13.22□□□□□ -0.29
P01739 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
P01739 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
P01739 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
P01739 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
P01739 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
P01739 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
P01739 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
P01739 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
P01739 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
P01739 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
P01739 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
P01739 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
P01739 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
P01739 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
P01739 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
P01739 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms