Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Kcnu1O54982 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Kcnu1O54982 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Kcnu1O54982 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Kcnu1O54982 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Kcnu1O54982 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Kcnu1O54982 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Kcnu1O54982 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC18.74■□□□□ 0.59
Kcnu1O54982 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Kcnu1O54982 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Kcnu1O54982 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Kcnu1O54982 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.74■□□□□ 0.59
Kcnu1O54982 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Kcnu1O54982 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Kcnu1O54982 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Kcnu1O54982 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Kcnu1O54982 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Kcnu1O54982 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Kcnu1O54982 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Kcnu1O54982 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Kcnu1O54982 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Kcnu1O54982 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Kcnu1O54982 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Kcnu1O54982 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Kcnu1O54982 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.73■□□□□ 0.59
Kcnu1O54982 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.73■□□□□ 0.59
Kcnu1O54982 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Kcnu1O54982 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Kcnu1O54982 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Kcnu1O54982 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Kcnu1O54982 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.73■□□□□ 0.59
Kcnu1O54982 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Kcnu1O54982 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Kcnu1O54982 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.73■□□□□ 0.59
Kcnu1O54982 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Kcnu1O54982 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Kcnu1O54982 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.72■□□□□ 0.59
Kcnu1O54982 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.72■□□□□ 0.59
Kcnu1O54982 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Kcnu1O54982 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
Kcnu1O54982 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Kcnu1O54982 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Kcnu1O54982 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Kcnu1O54982 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Kcnu1O54982 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Kcnu1O54982 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Kcnu1O54982 Gm10418-201ENSMUST00000100943 576 ntBASIC18.72■□□□□ 0.59
Kcnu1O54982 Gm27275-201ENSMUST00000184318 272 ntBASIC18.72■□□□□ 0.59
Kcnu1O54982 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Kcnu1O54982 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Kcnu1O54982 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Kcnu1O54982 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC18.72■□□□□ 0.59
Kcnu1O54982 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
Kcnu1O54982 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Kcnu1O54982 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Kcnu1O54982 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Kcnu1O54982 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.71■□□□□ 0.59
Kcnu1O54982 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Kcnu1O54982 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Kcnu1O54982 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Kcnu1O54982 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Kcnu1O54982 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Kcnu1O54982 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Kcnu1O54982 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Kcnu1O54982 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Kcnu1O54982 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Kcnu1O54982 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Kcnu1O54982 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Kcnu1O54982 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Kcnu1O54982 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Kcnu1O54982 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Kcnu1O54982 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Kcnu1O54982 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
Kcnu1O54982 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Kcnu1O54982 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Kcnu1O54982 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Kcnu1O54982 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.7■□□□□ 0.58
Kcnu1O54982 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Kcnu1O54982 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.7■□□□□ 0.58
Kcnu1O54982 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.7■□□□□ 0.58
Kcnu1O54982 Gm10138-203ENSMUST00000206952 366 ntBASIC18.7■□□□□ 0.58
Kcnu1O54982 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Kcnu1O54982 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Kcnu1O54982 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Kcnu1O54982 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Kcnu1O54982 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Kcnu1O54982 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.7■□□□□ 0.58
Kcnu1O54982 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Kcnu1O54982 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Kcnu1O54982 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Kcnu1O54982 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
Kcnu1O54982 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Kcnu1O54982 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Kcnu1O54982 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Kcnu1O54982 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Kcnu1O54982 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Kcnu1O54982 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Kcnu1O54982 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Kcnu1O54982 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.69■□□□□ 0.58
Kcnu1O54982 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms