Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3139J3QK78 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3139J3QK78 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
Gm3139J3QK78 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3139J3QK78 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3139J3QK78 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3139J3QK78 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3139J3QK78 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3139J3QK78 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3139J3QK78 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3139J3QK78 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3139J3QK78 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3139J3QK78 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.56■□□□□ 0.4
Gm3139J3QK78 Gm3375-201ENSMUST00000203929 796 ntBASIC17.56■□□□□ 0.4
Gm3139J3QK78 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Gm3139J3QK78 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3139J3QK78 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3139J3QK78 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3139J3QK78 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3139J3QK78 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3139J3QK78 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3139J3QK78 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3139J3QK78 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3139J3QK78 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3139J3QK78 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3139J3QK78 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3139J3QK78 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
Gm3139J3QK78 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.55■□□□□ 0.4
Gm3139J3QK78 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3139J3QK78 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.55■□□□□ 0.4
Gm3139J3QK78 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.55■□□□□ 0.4
Gm3139J3QK78 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.55■□□□□ 0.4
Gm3139J3QK78 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Gm3139J3QK78 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3139J3QK78 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3139J3QK78 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3139J3QK78 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3139J3QK78 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3139J3QK78 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3139J3QK78 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3139J3QK78 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
Gm3139J3QK78 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3139J3QK78 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3139J3QK78 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3139J3QK78 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3139J3QK78 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3139J3QK78 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3139J3QK78 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.54■□□□□ 0.4
Gm3139J3QK78 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.54■□□□□ 0.4
Gm3139J3QK78 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Gm3139J3QK78 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3139J3QK78 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3139J3QK78 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3139J3QK78 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3139J3QK78 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Gm3139J3QK78 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
Gm3139J3QK78 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3139J3QK78 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3139J3QK78 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3139J3QK78 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Gm3139J3QK78 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3139J3QK78 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm3139J3QK78 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm3139J3QK78 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Gm3139J3QK78 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.53■□□□□ 0.4
Gm3139J3QK78 Gm15565-201ENSMUST00000118890 427 ntBASIC17.53■□□□□ 0.4
Gm3139J3QK78 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Gm3139J3QK78 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Gm3139J3QK78 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Gm3139J3QK78 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.53■□□□□ 0.4
Gm3139J3QK78 Gm30025-201ENSMUST00000218555 728 ntBASIC17.53■□□□□ 0.4
Gm3139J3QK78 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Gm3139J3QK78 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm3139J3QK78 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Gm3139J3QK78 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm3139J3QK78 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm3139J3QK78 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm3139J3QK78 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm3139J3QK78 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm3139J3QK78 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Gm3139J3QK78 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm3139J3QK78 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Gm3139J3QK78 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Gm3139J3QK78 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm3139J3QK78 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Gm3139J3QK78 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Gm3139J3QK78 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.52■□□□□ 0.4
Gm3139J3QK78 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Gm3139J3QK78 Gm38027-201ENSMUST00000192315 235 ntBASIC17.52■□□□□ 0.4
Gm3139J3QK78 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm3139J3QK78 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm3139J3QK78 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Gm3139J3QK78 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Gm3139J3QK78 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.51■□□□□ 0.39
Gm3139J3QK78 Gm24841-201ENSMUST00000158676 357 ntBASIC17.51■□□□□ 0.39
Gm3139J3QK78 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm3139J3QK78 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Gm3139J3QK78 Mir7071-201ENSMUST00000184847 69 ntBASIC17.51■□□□□ 0.39
Gm3139J3QK78 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Gm3139J3QK78 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 106.6 ms