Protein–RNA interactions for Protein: F6ZDS4

Tpr, Nucleoprotein TPR, mousemouse

Known RBP Predictions only

Length 2,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TprF6ZDS4 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TprF6ZDS4 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TprF6ZDS4 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TprF6ZDS4 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TprF6ZDS4 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TprF6ZDS4 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TprF6ZDS4 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
TprF6ZDS4 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TprF6ZDS4 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TprF6ZDS4 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TprF6ZDS4 Mir8098-201ENSMUST00000184011 137 ntBASIC16.1■□□□□ 0.17
TprF6ZDS4 Gm34391-201ENSMUST00000203706 907 ntBASIC16.1■□□□□ 0.17
TprF6ZDS4 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.1■□□□□ 0.17
TprF6ZDS4 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC16.1■□□□□ 0.17
TprF6ZDS4 Gm7791-201ENSMUST00000219066 539 ntBASIC16.1■□□□□ 0.17
TprF6ZDS4 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TprF6ZDS4 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.1■□□□□ 0.17
TprF6ZDS4 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TprF6ZDS4 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TprF6ZDS4 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.1■□□□□ 0.17
TprF6ZDS4 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
TprF6ZDS4 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TprF6ZDS4 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TprF6ZDS4 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TprF6ZDS4 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
TprF6ZDS4 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
TprF6ZDS4 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
TprF6ZDS4 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.1■□□□□ 0.17
TprF6ZDS4 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TprF6ZDS4 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TprF6ZDS4 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TprF6ZDS4 Hsf1-204ENSMUST00000226872 2104 ntBASIC16.1■□□□□ 0.17
TprF6ZDS4 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TprF6ZDS4 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TprF6ZDS4 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TprF6ZDS4 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
TprF6ZDS4 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TprF6ZDS4 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TprF6ZDS4 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TprF6ZDS4 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
TprF6ZDS4 Gm43006-201ENSMUST00000197702 1602 ntBASIC16.09■□□□□ 0.17
TprF6ZDS4 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TprF6ZDS4 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TprF6ZDS4 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TprF6ZDS4 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
TprF6ZDS4 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
TprF6ZDS4 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.09■□□□□ 0.17
TprF6ZDS4 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TprF6ZDS4 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TprF6ZDS4 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16.09■□□□□ 0.17
TprF6ZDS4 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TprF6ZDS4 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.09■□□□□ 0.17
TprF6ZDS4 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
TprF6ZDS4 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TprF6ZDS4 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
TprF6ZDS4 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TprF6ZDS4 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
TprF6ZDS4 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TprF6ZDS4 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
TprF6ZDS4 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TprF6ZDS4 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TprF6ZDS4 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.09■□□□□ 0.17
TprF6ZDS4 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TprF6ZDS4 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TprF6ZDS4 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TprF6ZDS4 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TprF6ZDS4 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
TprF6ZDS4 Gm7638-201ENSMUST00000121348 967 ntBASIC16.08■□□□□ 0.17
TprF6ZDS4 Gm18733-201ENSMUST00000173950 856 ntBASIC16.08■□□□□ 0.17
TprF6ZDS4 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
TprF6ZDS4 Gm21559-201ENSMUST00000220638 855 ntBASIC16.08■□□□□ 0.17
TprF6ZDS4 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.08■□□□□ 0.17
TprF6ZDS4 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TprF6ZDS4 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TprF6ZDS4 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TprF6ZDS4 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
TprF6ZDS4 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TprF6ZDS4 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.08■□□□□ 0.16
TprF6ZDS4 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TprF6ZDS4 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
TprF6ZDS4 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TprF6ZDS4 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TprF6ZDS4 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TprF6ZDS4 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TprF6ZDS4 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TprF6ZDS4 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TprF6ZDS4 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TprF6ZDS4 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TprF6ZDS4 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TprF6ZDS4 Gm27459-201ENSMUST00000184860 107 ntBASIC16.07■□□□□ 0.16
TprF6ZDS4 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TprF6ZDS4 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TprF6ZDS4 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TprF6ZDS4 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TprF6ZDS4 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TprF6ZDS4 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TprF6ZDS4 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TprF6ZDS4 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
TprF6ZDS4 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.07■□□□□ 0.16
TprF6ZDS4 Auts2-212ENSMUST00000178555 309 ntBASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms