Protein–RNA interactions for Protein: A0A140T8T4

Rpl9-ps6, Ribosomal protein L9, pseudogene 6, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl9-ps6A0A140T8T4 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.05■□□□□ 0.48
Rpl9-ps6A0A140T8T4 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rpl9-ps6A0A140T8T4 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Rpl9-ps6A0A140T8T4 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.05■□□□□ 0.48
Rpl9-ps6A0A140T8T4 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rpl9-ps6A0A140T8T4 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rpl9-ps6A0A140T8T4 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Rpl9-ps6A0A140T8T4 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Rpl9-ps6A0A140T8T4 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Rpl9-ps6A0A140T8T4 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rpl9-ps6A0A140T8T4 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rpl9-ps6A0A140T8T4 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rpl9-ps6A0A140T8T4 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rpl9-ps6A0A140T8T4 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rpl9-ps6A0A140T8T4 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rpl9-ps6A0A140T8T4 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.04■□□□□ 0.48
Rpl9-ps6A0A140T8T4 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rpl9-ps6A0A140T8T4 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rpl9-ps6A0A140T8T4 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.04■□□□□ 0.48
Rpl9-ps6A0A140T8T4 Mir7071-201ENSMUST00000184847 69 ntBASIC18.04■□□□□ 0.48
Rpl9-ps6A0A140T8T4 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.04■□□□□ 0.48
Rpl9-ps6A0A140T8T4 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rpl9-ps6A0A140T8T4 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.04■□□□□ 0.48
Rpl9-ps6A0A140T8T4 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rpl9-ps6A0A140T8T4 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Rpl9-ps6A0A140T8T4 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Rpl9-ps6A0A140T8T4 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rpl9-ps6A0A140T8T4 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rpl9-ps6A0A140T8T4 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.03■□□□□ 0.48
Rpl9-ps6A0A140T8T4 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rpl9-ps6A0A140T8T4 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rpl9-ps6A0A140T8T4 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rpl9-ps6A0A140T8T4 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rpl9-ps6A0A140T8T4 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Rpl9-ps6A0A140T8T4 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rpl9-ps6A0A140T8T4 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rpl9-ps6A0A140T8T4 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rpl9-ps6A0A140T8T4 Mir8112-201ENSMUST00000184382 131 ntBASIC18.03■□□□□ 0.48
Rpl9-ps6A0A140T8T4 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rpl9-ps6A0A140T8T4 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Rpl9-ps6A0A140T8T4 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rpl9-ps6A0A140T8T4 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.03■□□□□ 0.48
Rpl9-ps6A0A140T8T4 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rpl9-ps6A0A140T8T4 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.03■□□□□ 0.48
Rpl9-ps6A0A140T8T4 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rpl9-ps6A0A140T8T4 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rpl9-ps6A0A140T8T4 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Rpl9-ps6A0A140T8T4 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Rpl9-ps6A0A140T8T4 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rpl9-ps6A0A140T8T4 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
Rpl9-ps6A0A140T8T4 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rpl9-ps6A0A140T8T4 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rpl9-ps6A0A140T8T4 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rpl9-ps6A0A140T8T4 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rpl9-ps6A0A140T8T4 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Rpl9-ps6A0A140T8T4 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rpl9-ps6A0A140T8T4 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.02■□□□□ 0.48
Rpl9-ps6A0A140T8T4 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Rpl9-ps6A0A140T8T4 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rpl9-ps6A0A140T8T4 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.02■□□□□ 0.48
Rpl9-ps6A0A140T8T4 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Rpl9-ps6A0A140T8T4 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Rpl9-ps6A0A140T8T4 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.02■□□□□ 0.48
Rpl9-ps6A0A140T8T4 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rpl9-ps6A0A140T8T4 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rpl9-ps6A0A140T8T4 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.02■□□□□ 0.47
Rpl9-ps6A0A140T8T4 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rpl9-ps6A0A140T8T4 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rpl9-ps6A0A140T8T4 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rpl9-ps6A0A140T8T4 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rpl9-ps6A0A140T8T4 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.01■□□□□ 0.47
Rpl9-ps6A0A140T8T4 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.01■□□□□ 0.47
Rpl9-ps6A0A140T8T4 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rpl9-ps6A0A140T8T4 Gm27463-201ENSMUST00000183569 57 ntBASIC18.01■□□□□ 0.47
Rpl9-ps6A0A140T8T4 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.01■□□□□ 0.47
Rpl9-ps6A0A140T8T4 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rpl9-ps6A0A140T8T4 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rpl9-ps6A0A140T8T4 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rpl9-ps6A0A140T8T4 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rpl9-ps6A0A140T8T4 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rpl9-ps6A0A140T8T4 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rpl9-ps6A0A140T8T4 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rpl9-ps6A0A140T8T4 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rpl9-ps6A0A140T8T4 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Rpl9-ps6A0A140T8T4 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Rpl9-ps6A0A140T8T4 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rpl9-ps6A0A140T8T4 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rpl9-ps6A0A140T8T4 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Rpl9-ps6A0A140T8T4 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
Rpl9-ps6A0A140T8T4 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18■□□□□ 0.47
Rpl9-ps6A0A140T8T4 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18■□□□□ 0.47
Rpl9-ps6A0A140T8T4 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Rpl9-ps6A0A140T8T4 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rpl9-ps6A0A140T8T4 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18■□□□□ 0.47
Rpl9-ps6A0A140T8T4 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rpl9-ps6A0A140T8T4 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Rpl9-ps6A0A140T8T4 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
Rpl9-ps6A0A140T8T4 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Rpl9-ps6A0A140T8T4 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rpl9-ps6A0A140T8T4 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms