Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9d-4A0A0G2JG37 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9d-4A0A0G2JG37 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9d-4A0A0G2JG37 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9d-4A0A0G2JG37 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9d-4A0A0G2JG37 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9d-4A0A0G2JG37 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9d-4A0A0G2JG37 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9d-4A0A0G2JG37 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9d-4A0A0G2JG37 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9d-4A0A0G2JG37 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9d-4A0A0G2JG37 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9d-4A0A0G2JG37 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9d-4A0A0G2JG37 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trav9d-4A0A0G2JG37 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9d-4A0A0G2JG37 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9d-4A0A0G2JG37 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav9d-4A0A0G2JG37 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9d-4A0A0G2JG37 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Trav9d-4A0A0G2JG37 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trav9d-4A0A0G2JG37 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trav9d-4A0A0G2JG37 Gm10167-201ENSMUST00000150411 1479 ntBASIC12.08□□□□□ -0.47
Trav9d-4A0A0G2JG37 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9d-4A0A0G2JG37 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trav9d-4A0A0G2JG37 Gm43034-201ENSMUST00000198678 1364 ntBASIC12.08□□□□□ -0.48
Trav9d-4A0A0G2JG37 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9d-4A0A0G2JG37 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9d-4A0A0G2JG37 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9d-4A0A0G2JG37 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9d-4A0A0G2JG37 Gm27032-201ENSMUST00000183124 1116 ntBASIC12.08□□□□□ -0.48
Trav9d-4A0A0G2JG37 Gm19094-201ENSMUST00000209791 1246 ntBASIC12.08□□□□□ -0.48
Trav9d-4A0A0G2JG37 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Trav9d-4A0A0G2JG37 AC107452.1-201ENSMUST00000227963 481 ntBASIC12.08□□□□□ -0.48
Trav9d-4A0A0G2JG37 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9d-4A0A0G2JG37 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC12.08□□□□□ -0.48
Trav9d-4A0A0G2JG37 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9d-4A0A0G2JG37 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9d-4A0A0G2JG37 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9d-4A0A0G2JG37 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9d-4A0A0G2JG37 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9d-4A0A0G2JG37 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9d-4A0A0G2JG37 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9d-4A0A0G2JG37 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9d-4A0A0G2JG37 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav9d-4A0A0G2JG37 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9d-4A0A0G2JG37 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trav9d-4A0A0G2JG37 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Trav9d-4A0A0G2JG37 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9d-4A0A0G2JG37 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9d-4A0A0G2JG37 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9d-4A0A0G2JG37 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9d-4A0A0G2JG37 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9d-4A0A0G2JG37 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trav9d-4A0A0G2JG37 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9d-4A0A0G2JG37 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9d-4A0A0G2JG37 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9d-4A0A0G2JG37 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC12.07□□□□□ -0.48
Trav9d-4A0A0G2JG37 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9d-4A0A0G2JG37 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9d-4A0A0G2JG37 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9d-4A0A0G2JG37 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9d-4A0A0G2JG37 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9d-4A0A0G2JG37 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9d-4A0A0G2JG37 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav9d-4A0A0G2JG37 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC12.07□□□□□ -0.48
Trav9d-4A0A0G2JG37 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trav9d-4A0A0G2JG37 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9d-4A0A0G2JG37 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav9d-4A0A0G2JG37 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9d-4A0A0G2JG37 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9d-4A0A0G2JG37 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9d-4A0A0G2JG37 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9d-4A0A0G2JG37 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9d-4A0A0G2JG37 Gm26917-202ENSMUST00000192833 3329 ntBASIC12.06□□□□□ -0.48
Trav9d-4A0A0G2JG37 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trav9d-4A0A0G2JG37 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trav9d-4A0A0G2JG37 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Trav9d-4A0A0G2JG37 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9d-4A0A0G2JG37 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Trav9d-4A0A0G2JG37 Gm12821-201ENSMUST00000120022 600 ntBASIC12.06□□□□□ -0.48
Trav9d-4A0A0G2JG37 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9d-4A0A0G2JG37 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC12.06□□□□□ -0.48
Trav9d-4A0A0G2JG37 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9d-4A0A0G2JG37 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC12.06□□□□□ -0.48
Trav9d-4A0A0G2JG37 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9d-4A0A0G2JG37 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
Trav9d-4A0A0G2JG37 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9d-4A0A0G2JG37 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9d-4A0A0G2JG37 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9d-4A0A0G2JG37 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9d-4A0A0G2JG37 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9d-4A0A0G2JG37 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9d-4A0A0G2JG37 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9d-4A0A0G2JG37 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9d-4A0A0G2JG37 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9d-4A0A0G2JG37 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9d-4A0A0G2JG37 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9d-4A0A0G2JG37 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9d-4A0A0G2JG37 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9d-4A0A0G2JG37 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms