Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav3n-3A0A0G2JEM0 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC13.33□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC13.33□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav3n-3A0A0G2JEM0 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC13.33□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav3n-3A0A0G2JEM0 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC13.33□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav3n-3A0A0G2JEM0 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Gm45906-201ENSMUST00000208911 1430 ntBASIC13.32□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC13.32□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC13.32□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav3n-3A0A0G2JEM0 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC13.32□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC13.31□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Gm12251-201ENSMUST00000117893 792 ntBASIC13.31□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav3n-3A0A0G2JEM0 AC140930.3-201ENSMUST00000222935 274 ntBASIC13.31□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav3n-3A0A0G2JEM0 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC13.31□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav3n-3A0A0G2JEM0 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC13.3□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Gm27032-201ENSMUST00000183124 1116 ntBASIC13.3□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Mir7075-201ENSMUST00000184187 82 ntBASIC13.3□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC13.3□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav3n-3A0A0G2JEM0 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms