Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Trbv13-3A0A0B4J1H2 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Trbv13-3A0A0B4J1H2 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv13-3A0A0B4J1H2 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv13-3A0A0B4J1H2 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv13-3A0A0B4J1H2 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC13.72□□□□□ -0.21
Trbv13-3A0A0B4J1H2 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv13-3A0A0B4J1H2 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Trbv13-3A0A0B4J1H2 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv13-3A0A0B4J1H2 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC13.72□□□□□ -0.21
Trbv13-3A0A0B4J1H2 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC13.72□□□□□ -0.21
Trbv13-3A0A0B4J1H2 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv13-3A0A0B4J1H2 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv13-3A0A0B4J1H2 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Trbv13-3A0A0B4J1H2 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv13-3A0A0B4J1H2 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC13.71□□□□□ -0.21
Trbv13-3A0A0B4J1H2 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv13-3A0A0B4J1H2 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv13-3A0A0B4J1H2 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv13-3A0A0B4J1H2 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv13-3A0A0B4J1H2 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv13-3A0A0B4J1H2 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv13-3A0A0B4J1H2 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv13-3A0A0B4J1H2 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv13-3A0A0B4J1H2 Mir8112-201ENSMUST00000184382 131 ntBASIC13.71□□□□□ -0.21
Trbv13-3A0A0B4J1H2 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv13-3A0A0B4J1H2 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv13-3A0A0B4J1H2 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv13-3A0A0B4J1H2 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv13-3A0A0B4J1H2 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv13-3A0A0B4J1H2 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv13-3A0A0B4J1H2 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trbv13-3A0A0B4J1H2 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trbv13-3A0A0B4J1H2 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trbv13-3A0A0B4J1H2 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC13.71□□□□□ -0.22
Trbv13-3A0A0B4J1H2 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.22
Trbv13-3A0A0B4J1H2 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trbv13-3A0A0B4J1H2 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trbv13-3A0A0B4J1H2 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trbv13-3A0A0B4J1H2 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trbv13-3A0A0B4J1H2 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trbv13-3A0A0B4J1H2 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.22
Trbv13-3A0A0B4J1H2 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trbv13-3A0A0B4J1H2 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv13-3A0A0B4J1H2 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv13-3A0A0B4J1H2 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv13-3A0A0B4J1H2 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv13-3A0A0B4J1H2 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv13-3A0A0B4J1H2 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv13-3A0A0B4J1H2 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv13-3A0A0B4J1H2 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv13-3A0A0B4J1H2 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv13-3A0A0B4J1H2 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv13-3A0A0B4J1H2 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv13-3A0A0B4J1H2 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv13-3A0A0B4J1H2 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv13-3A0A0B4J1H2 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv13-3A0A0B4J1H2 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv13-3A0A0B4J1H2 Gm9207-201ENSMUST00000198773 1115 ntBASIC13.7□□□□□ -0.22
Trbv13-3A0A0B4J1H2 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv13-3A0A0B4J1H2 AC160393.1-201ENSMUST00000218378 1279 ntBASIC13.7□□□□□ -0.22
Trbv13-3A0A0B4J1H2 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv13-3A0A0B4J1H2 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv13-3A0A0B4J1H2 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv13-3A0A0B4J1H2 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Trbv13-3A0A0B4J1H2 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv13-3A0A0B4J1H2 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trbv13-3A0A0B4J1H2 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv13-3A0A0B4J1H2 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv13-3A0A0B4J1H2 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv13-3A0A0B4J1H2 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Trbv13-3A0A0B4J1H2 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv13-3A0A0B4J1H2 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv13-3A0A0B4J1H2 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv13-3A0A0B4J1H2 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv13-3A0A0B4J1H2 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv13-3A0A0B4J1H2 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv13-3A0A0B4J1H2 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv13-3A0A0B4J1H2 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv13-3A0A0B4J1H2 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv13-3A0A0B4J1H2 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv13-3A0A0B4J1H2 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC13.69□□□□□ -0.22
Trbv13-3A0A0B4J1H2 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC13.69□□□□□ -0.22
Trbv13-3A0A0B4J1H2 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv13-3A0A0B4J1H2 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trbv13-3A0A0B4J1H2 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv13-3A0A0B4J1H2 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv13-3A0A0B4J1H2 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv13-3A0A0B4J1H2 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv13-3A0A0B4J1H2 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Trbv13-3A0A0B4J1H2 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv13-3A0A0B4J1H2 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv13-3A0A0B4J1H2 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv13-3A0A0B4J1H2 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv13-3A0A0B4J1H2 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv13-3A0A0B4J1H2 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv13-3A0A0B4J1H2 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC13.69□□□□□ -0.22
Trbv13-3A0A0B4J1H2 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv13-3A0A0B4J1H2 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC13.68□□□□□ -0.22
Trbv13-3A0A0B4J1H2 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms