Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Gm42911-201ENSMUST00000199360 1630 ntBASIC11.9□□□□□ -0.5
Trav3-4A0A075B654 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav3-4A0A075B654 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC11.9□□□□□ -0.5
Trav3-4A0A075B654 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav3-4A0A075B654 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav3-4A0A075B654 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav3-4A0A075B654 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC11.9□□□□□ -0.5
Trav3-4A0A075B654 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC11.9□□□□□ -0.5
Trav3-4A0A075B654 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav3-4A0A075B654 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC11.9□□□□□ -0.5
Trav3-4A0A075B654 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav3-4A0A075B654 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Trav3-4A0A075B654 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav3-4A0A075B654 Gm9870-201ENSMUST00000063874 645 ntBASIC11.9□□□□□ -0.5
Trav3-4A0A075B654 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav3-4A0A075B654 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav3-4A0A075B654 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC11.9□□□□□ -0.5
Trav3-4A0A075B654 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav3-4A0A075B654 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav3-4A0A075B654 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav3-4A0A075B654 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav3-4A0A075B654 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav3-4A0A075B654 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav3-4A0A075B654 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav3-4A0A075B654 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav3-4A0A075B654 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav3-4A0A075B654 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav3-4A0A075B654 Gm10710-201ENSMUST00000047876 3971 ntBASIC11.89□□□□□ -0.51
Trav3-4A0A075B654 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav3-4A0A075B654 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav3-4A0A075B654 Gm20628-201ENSMUST00000177363 3215 ntBASIC11.89□□□□□ -0.51
Trav3-4A0A075B654 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav3-4A0A075B654 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav3-4A0A075B654 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav3-4A0A075B654 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav3-4A0A075B654 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav3-4A0A075B654 Nsd1-203ENSMUST00000224156 1149 ntBASIC11.89□□□□□ -0.51
Trav3-4A0A075B654 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Trav3-4A0A075B654 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav3-4A0A075B654 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav3-4A0A075B654 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav3-4A0A075B654 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
Trav3-4A0A075B654 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav3-4A0A075B654 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav3-4A0A075B654 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav3-4A0A075B654 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav3-4A0A075B654 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Trav3-4A0A075B654 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC11.89□□□□□ -0.51
Trav3-4A0A075B654 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3-4A0A075B654 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trav3-4A0A075B654 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3-4A0A075B654 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3-4A0A075B654 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3-4A0A075B654 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3-4A0A075B654 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3-4A0A075B654 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3-4A0A075B654 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3-4A0A075B654 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3-4A0A075B654 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3-4A0A075B654 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC11.88□□□□□ -0.51
Trav3-4A0A075B654 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3-4A0A075B654 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3-4A0A075B654 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3-4A0A075B654 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC11.88□□□□□ -0.51
Trav3-4A0A075B654 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3-4A0A075B654 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3-4A0A075B654 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3-4A0A075B654 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3-4A0A075B654 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC11.88□□□□□ -0.51
Trav3-4A0A075B654 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3-4A0A075B654 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3-4A0A075B654 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3-4A0A075B654 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3-4A0A075B654 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3-4A0A075B654 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav3-4A0A075B654 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav3-4A0A075B654 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav3-4A0A075B654 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav3-4A0A075B654 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Trav3-4A0A075B654 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
Trav3-4A0A075B654 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC11.87□□□□□ -0.51
Trav3-4A0A075B654 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav3-4A0A075B654 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Trav3-4A0A075B654 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav3-4A0A075B654 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav3-4A0A075B654 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Trav3-4A0A075B654 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav3-4A0A075B654 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav3-4A0A075B654 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC11.87□□□□□ -0.51
Trav3-4A0A075B654 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav3-4A0A075B654 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav3-4A0A075B654 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav3-4A0A075B654 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav3-4A0A075B654 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Trav3-4A0A075B654 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav3-4A0A075B654 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav3-4A0A075B654 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav3-4A0A075B654 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav3-4A0A075B654 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav3-4A0A075B654 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms