Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav15-2-dv6-2A0A075B650 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav15-2-dv6-2A0A075B650 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav15-2-dv6-2A0A075B650 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav15-2-dv6-2A0A075B650 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trav15-2-dv6-2A0A075B650 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav15-2-dv6-2A0A075B650 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trav15-2-dv6-2A0A075B650 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav15-2-dv6-2A0A075B650 Gm15743-202ENSMUST00000182690 1901 ntBASIC14.41□□□□□ -0.1
Trav15-2-dv6-2A0A075B650 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC14.41□□□□□ -0.1
Trav15-2-dv6-2A0A075B650 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav15-2-dv6-2A0A075B650 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav15-2-dv6-2A0A075B650 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav15-2-dv6-2A0A075B650 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav15-2-dv6-2A0A075B650 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav15-2-dv6-2A0A075B650 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav15-2-dv6-2A0A075B650 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav15-2-dv6-2A0A075B650 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav15-2-dv6-2A0A075B650 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav15-2-dv6-2A0A075B650 Gm10655-201ENSMUST00000098658 1397 ntBASIC14.4□□□□□ -0.1
Trav15-2-dv6-2A0A075B650 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav15-2-dv6-2A0A075B650 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Trav15-2-dv6-2A0A075B650 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav15-2-dv6-2A0A075B650 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav15-2-dv6-2A0A075B650 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav15-2-dv6-2A0A075B650 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav15-2-dv6-2A0A075B650 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav15-2-dv6-2A0A075B650 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav15-2-dv6-2A0A075B650 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trav15-2-dv6-2A0A075B650 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trav15-2-dv6-2A0A075B650 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trav15-2-dv6-2A0A075B650 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC14.39□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Cxcl14-202ENSMUST00000224801 1467 ntBASIC14.39□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC14.39□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC14.39□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC14.39□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC14.38□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC14.38□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC14.38□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC14.38□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC14.38□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC14.38□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Nespas-201ENSMUST00000143738 1083 ntBASIC14.37□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Gm21168-201ENSMUST00000199646 1096 ntBASIC14.37□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC14.37□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms