Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav4-2A0A075B638 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav4-2A0A075B638 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trav4-2A0A075B638 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav4-2A0A075B638 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav4-2A0A075B638 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC13.97□□□□□ -0.17
Trav4-2A0A075B638 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav4-2A0A075B638 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC13.97□□□□□ -0.17
Trav4-2A0A075B638 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC13.97□□□□□ -0.17
Trav4-2A0A075B638 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav4-2A0A075B638 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav4-2A0A075B638 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav4-2A0A075B638 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav4-2A0A075B638 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav4-2A0A075B638 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav4-2A0A075B638 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav4-2A0A075B638 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav4-2A0A075B638 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav4-2A0A075B638 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav4-2A0A075B638 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav4-2A0A075B638 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav4-2A0A075B638 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav4-2A0A075B638 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav4-2A0A075B638 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav4-2A0A075B638 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav4-2A0A075B638 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Trav4-2A0A075B638 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Trav4-2A0A075B638 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav4-2A0A075B638 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav4-2A0A075B638 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav4-2A0A075B638 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav4-2A0A075B638 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav4-2A0A075B638 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav4-2A0A075B638 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC13.96□□□□□ -0.17
Trav4-2A0A075B638 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav4-2A0A075B638 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav4-2A0A075B638 Mir7075-201ENSMUST00000184187 82 ntBASIC13.96□□□□□ -0.17
Trav4-2A0A075B638 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC13.96□□□□□ -0.17
Trav4-2A0A075B638 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC13.96□□□□□ -0.17
Trav4-2A0A075B638 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav4-2A0A075B638 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Trav4-2A0A075B638 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav4-2A0A075B638 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Trav4-2A0A075B638 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.18
Trav4-2A0A075B638 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav4-2A0A075B638 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Trav4-2A0A075B638 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav4-2A0A075B638 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav4-2A0A075B638 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav4-2A0A075B638 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav4-2A0A075B638 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trav4-2A0A075B638 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav4-2A0A075B638 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav4-2A0A075B638 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav4-2A0A075B638 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav4-2A0A075B638 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trav4-2A0A075B638 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav4-2A0A075B638 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Trav4-2A0A075B638 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav4-2A0A075B638 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Trav4-2A0A075B638 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC13.95□□□□□ -0.18
Trav4-2A0A075B638 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav4-2A0A075B638 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav4-2A0A075B638 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC13.94□□□□□ -0.18
Trav4-2A0A075B638 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav4-2A0A075B638 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav4-2A0A075B638 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav4-2A0A075B638 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav4-2A0A075B638 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Trav4-2A0A075B638 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav4-2A0A075B638 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC13.94□□□□□ -0.18
Trav4-2A0A075B638 Gm13146-201ENSMUST00000118508 780 ntBASIC13.94□□□□□ -0.18
Trav4-2A0A075B638 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav4-2A0A075B638 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav4-2A0A075B638 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav4-2A0A075B638 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav4-2A0A075B638 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Trav4-2A0A075B638 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav4-2A0A075B638 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav4-2A0A075B638 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Trav4-2A0A075B638 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Trav4-2A0A075B638 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Trav4-2A0A075B638 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav4-2A0A075B638 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav4-2A0A075B638 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav4-2A0A075B638 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC13.93□□□□□ -0.18
Trav4-2A0A075B638 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav4-2A0A075B638 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav4-2A0A075B638 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav4-2A0A075B638 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
Trav4-2A0A075B638 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav4-2A0A075B638 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav4-2A0A075B638 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav4-2A0A075B638 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav4-2A0A075B638 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC13.93□□□□□ -0.18
Trav4-2A0A075B638 Gm13534-201ENSMUST00000121169 513 ntBASIC13.93□□□□□ -0.18
Trav4-2A0A075B638 Mir8112-201ENSMUST00000184382 131 ntBASIC13.93□□□□□ -0.18
Trav4-2A0A075B638 Gm8493-201ENSMUST00000196881 489 ntBASIC13.93□□□□□ -0.18
Trav4-2A0A075B638 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav4-2A0A075B638 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms