Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav16d-dv11A0A075B617 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav16d-dv11A0A075B617 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav16d-dv11A0A075B617 Gm5522-201ENSMUST00000189483 1242 ntBASIC12.96□□□□□ -0.33
Trav16d-dv11A0A075B617 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav16d-dv11A0A075B617 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC12.96□□□□□ -0.33
Trav16d-dv11A0A075B617 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav16d-dv11A0A075B617 Gm45774-201ENSMUST00000211992 2665 ntBASIC12.96□□□□□ -0.33
Trav16d-dv11A0A075B617 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav16d-dv11A0A075B617 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav16d-dv11A0A075B617 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav16d-dv11A0A075B617 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav16d-dv11A0A075B617 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav16d-dv11A0A075B617 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav16d-dv11A0A075B617 Gm10167-201ENSMUST00000150411 1479 ntBASIC12.96□□□□□ -0.34
Trav16d-dv11A0A075B617 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav16d-dv11A0A075B617 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav16d-dv11A0A075B617 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trav16d-dv11A0A075B617 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav16d-dv11A0A075B617 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav16d-dv11A0A075B617 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav16d-dv11A0A075B617 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav16d-dv11A0A075B617 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav16d-dv11A0A075B617 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC12.95□□□□□ -0.34
Trav16d-dv11A0A075B617 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav16d-dv11A0A075B617 Gm27801-201ENSMUST00000184174 223 ntBASIC12.95□□□□□ -0.34
Trav16d-dv11A0A075B617 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav16d-dv11A0A075B617 Golgb1-201ENSMUST00000023534 498 ntBASIC12.95□□□□□ -0.34
Trav16d-dv11A0A075B617 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav16d-dv11A0A075B617 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC12.95□□□□□ -0.34
Trav16d-dv11A0A075B617 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav16d-dv11A0A075B617 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav16d-dv11A0A075B617 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav16d-dv11A0A075B617 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav16d-dv11A0A075B617 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav16d-dv11A0A075B617 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC12.95□□□□□ -0.34
Trav16d-dv11A0A075B617 Gm8309-201ENSMUST00000206627 1448 ntBASIC12.95□□□□□ -0.34
Trav16d-dv11A0A075B617 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav16d-dv11A0A075B617 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav16d-dv11A0A075B617 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav16d-dv11A0A075B617 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav16d-dv11A0A075B617 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav16d-dv11A0A075B617 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav16d-dv11A0A075B617 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav16d-dv11A0A075B617 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav16d-dv11A0A075B617 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav16d-dv11A0A075B617 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Trav16d-dv11A0A075B617 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav16d-dv11A0A075B617 AC165080.2-201ENSMUST00000217491 1530 ntBASIC12.94□□□□□ -0.34
Trav16d-dv11A0A075B617 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav16d-dv11A0A075B617 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav16d-dv11A0A075B617 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav16d-dv11A0A075B617 Gm11421-201ENSMUST00000122124 294 ntBASIC12.94□□□□□ -0.34
Trav16d-dv11A0A075B617 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav16d-dv11A0A075B617 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Trav16d-dv11A0A075B617 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav16d-dv11A0A075B617 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav16d-dv11A0A075B617 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav16d-dv11A0A075B617 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav16d-dv11A0A075B617 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trav16d-dv11A0A075B617 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trav16d-dv11A0A075B617 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav16d-dv11A0A075B617 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav16d-dv11A0A075B617 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Trav16d-dv11A0A075B617 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav16d-dv11A0A075B617 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav16d-dv11A0A075B617 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trav16d-dv11A0A075B617 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav16d-dv11A0A075B617 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav16d-dv11A0A075B617 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trav16d-dv11A0A075B617 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav16d-dv11A0A075B617 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav16d-dv11A0A075B617 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC12.93□□□□□ -0.34
Trav16d-dv11A0A075B617 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav16d-dv11A0A075B617 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav16d-dv11A0A075B617 Dancr-204ENSMUST00000132389 2347 ntBASIC12.93□□□□□ -0.34
Trav16d-dv11A0A075B617 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav16d-dv11A0A075B617 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav16d-dv11A0A075B617 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC12.93□□□□□ -0.34
Trav16d-dv11A0A075B617 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav16d-dv11A0A075B617 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trav16d-dv11A0A075B617 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav16d-dv11A0A075B617 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav16d-dv11A0A075B617 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
Trav16d-dv11A0A075B617 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav16d-dv11A0A075B617 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav16d-dv11A0A075B617 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav16d-dv11A0A075B617 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC12.93□□□□□ -0.34
Trav16d-dv11A0A075B617 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trav16d-dv11A0A075B617 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trav16d-dv11A0A075B617 Gm9867-201ENSMUST00000192212 2647 ntBASIC12.92□□□□□ -0.34
Trav16d-dv11A0A075B617 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav16d-dv11A0A075B617 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav16d-dv11A0A075B617 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Trav16d-dv11A0A075B617 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav16d-dv11A0A075B617 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav16d-dv11A0A075B617 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav16d-dv11A0A075B617 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav16d-dv11A0A075B617 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC12.92□□□□□ -0.34
Trav16d-dv11A0A075B617 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms