Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav4n-4A0A075B615 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC12.23□□□□□ -0.45
Trav4n-4A0A075B615 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav4n-4A0A075B615 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav4n-4A0A075B615 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC12.23□□□□□ -0.45
Trav4n-4A0A075B615 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav4n-4A0A075B615 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Trav4n-4A0A075B615 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trav4n-4A0A075B615 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav4n-4A0A075B615 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav4n-4A0A075B615 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav4n-4A0A075B615 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav4n-4A0A075B615 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav4n-4A0A075B615 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav4n-4A0A075B615 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Trav4n-4A0A075B615 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav4n-4A0A075B615 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav4n-4A0A075B615 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav4n-4A0A075B615 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC12.23□□□□□ -0.45
Trav4n-4A0A075B615 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav4n-4A0A075B615 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav4n-4A0A075B615 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav4n-4A0A075B615 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav4n-4A0A075B615 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav4n-4A0A075B615 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav4n-4A0A075B615 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav4n-4A0A075B615 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav4n-4A0A075B615 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav4n-4A0A075B615 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav4n-4A0A075B615 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav4n-4A0A075B615 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav4n-4A0A075B615 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav4n-4A0A075B615 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav4n-4A0A075B615 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trav4n-4A0A075B615 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC12.22□□□□□ -0.45
Trav4n-4A0A075B615 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC12.22□□□□□ -0.45
Trav4n-4A0A075B615 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav4n-4A0A075B615 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC12.22□□□□□ -0.45
Trav4n-4A0A075B615 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trav4n-4A0A075B615 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav4n-4A0A075B615 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav4n-4A0A075B615 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
Trav4n-4A0A075B615 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC12.22□□□□□ -0.45
Trav4n-4A0A075B615 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav4n-4A0A075B615 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav4n-4A0A075B615 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Trav4n-4A0A075B615 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav4n-4A0A075B615 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav4n-4A0A075B615 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav4n-4A0A075B615 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC12.22□□□□□ -0.45
Trav4n-4A0A075B615 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav4n-4A0A075B615 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav4n-4A0A075B615 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav4n-4A0A075B615 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav4n-4A0A075B615 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trav4n-4A0A075B615 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav4n-4A0A075B615 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav4n-4A0A075B615 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav4n-4A0A075B615 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav4n-4A0A075B615 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav4n-4A0A075B615 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav4n-4A0A075B615 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Trav4n-4A0A075B615 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav4n-4A0A075B615 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Trav4n-4A0A075B615 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav4n-4A0A075B615 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC12.21□□□□□ -0.45
Trav4n-4A0A075B615 Gm43566-201ENSMUST00000196851 808 ntBASIC12.21□□□□□ -0.45
Trav4n-4A0A075B615 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav4n-4A0A075B615 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav4n-4A0A075B615 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav4n-4A0A075B615 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav4n-4A0A075B615 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav4n-4A0A075B615 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Trav4n-4A0A075B615 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Trav4n-4A0A075B615 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav4n-4A0A075B615 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Trav4n-4A0A075B615 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav4n-4A0A075B615 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav4n-4A0A075B615 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC12.21□□□□□ -0.46
Trav4n-4A0A075B615 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trav4n-4A0A075B615 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Trav4n-4A0A075B615 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav4n-4A0A075B615 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav4n-4A0A075B615 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav4n-4A0A075B615 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav4n-4A0A075B615 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav4n-4A0A075B615 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav4n-4A0A075B615 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav4n-4A0A075B615 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav4n-4A0A075B615 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trav4n-4A0A075B615 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav4n-4A0A075B615 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav4n-4A0A075B615 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav4n-4A0A075B615 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC12.2□□□□□ -0.46
Trav4n-4A0A075B615 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC12.2□□□□□ -0.46
Trav4n-4A0A075B615 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav4n-4A0A075B615 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav4n-4A0A075B615 Gm37563-201ENSMUST00000192580 1513 ntBASIC12.2□□□□□ -0.46
Trav4n-4A0A075B615 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav4n-4A0A075B615 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms