Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm26835-201ENSMUST00000181888 3274 ntTSL 5 BASIC6.51□□□□□ -1.37
Clp1Q99LI9 Fbxw19-201ENSMUST00000076617 1483 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Clp1Q99LI9 Gm37762-201ENSMUST00000194515 3561 ntBASIC6.51□□□□□ -1.37
Clp1Q99LI9 Bmpr1b-204ENSMUST00000106232 4164 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Clp1Q99LI9 Gm44175-201ENSMUST00000204863 4256 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Clp1Q99LI9 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Clp1Q99LI9 Syt14-203ENSMUST00000195354 7882 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
Clp1Q99LI9 Unc13c-202ENSMUST00000184666 8796 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Clp1Q99LI9 Pard3-212ENSMUST00000160717 4214 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Clp1Q99LI9 4930594C11Rik-201ENSMUST00000192316 2755 ntBASIC6.51□□□□□ -1.37
Clp1Q99LI9 Tbcel-202ENSMUST00000066179 3893 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Clp1Q99LI9 Gm42873-201ENSMUST00000196110 1726 ntBASIC6.5□□□□□ -1.37
Clp1Q99LI9 AC121504.1-201ENSMUST00000221385 2705 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Clp1Q99LI9 Gm38077-201ENSMUST00000193657 3245 ntBASIC6.5□□□□□ -1.37
Clp1Q99LI9 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC6.5□□□□□ -1.37
Clp1Q99LI9 BC055402-201ENSMUST00000190488 3301 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Clp1Q99LI9 Vwa5a-202ENSMUST00000118144 3502 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Clp1Q99LI9 Abca4-207ENSMUST00000141135 3606 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Clp1Q99LI9 Gm5128-202ENSMUST00000180198 3836 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Clp1Q99LI9 Olfr734-203ENSMUST00000217152 4416 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Clp1Q99LI9 Kat6a-202ENSMUST00000110696 9041 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Clp1Q99LI9 AC162467.3-201ENSMUST00000219716 2172 ntBASIC6.5□□□□□ -1.37
Clp1Q99LI9 Gm9602-201ENSMUST00000163325 2062 ntAPPRIS P5 TSL 1 (best) BASIC6.5□□□□□ -1.37
Clp1Q99LI9 Gm8356-201ENSMUST00000163636 2062 ntAPPRIS P5 TSL 5 BASIC6.5□□□□□ -1.37
Clp1Q99LI9 Gm42704-201ENSMUST00000196875 1778 ntBASIC6.5□□□□□ -1.37
Clp1Q99LI9 Mir883a-201ENSMUST00000104824 76 ntBASIC6.5□□□□□ -1.37
Clp1Q99LI9 Gm13870-201ENSMUST00000117214 1023 ntBASIC6.5□□□□□ -1.37
Clp1Q99LI9 Gm12040-201ENSMUST00000118357 537 ntBASIC6.5□□□□□ -1.37
Clp1Q99LI9 Zfp389-201ENSMUST00000118425 675 ntBASIC6.5□□□□□ -1.37
Clp1Q99LI9 Gm13991-201ENSMUST00000120190 648 ntBASIC6.5□□□□□ -1.37
Clp1Q99LI9 Gm8545-201ENSMUST00000120692 801 ntBASIC6.5□□□□□ -1.37
Clp1Q99LI9 Gm14362-201ENSMUST00000121679 273 ntBASIC6.5□□□□□ -1.37
Clp1Q99LI9 Saxo1os-201ENSMUST00000131790 628 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Clp1Q99LI9 Gm15254-201ENSMUST00000149567 273 ntBASIC6.5□□□□□ -1.37
Clp1Q99LI9 Gm22867-201ENSMUST00000157499 109 ntBASIC6.5□□□□□ -1.37
Clp1Q99LI9 Malat1-203ENSMUST00000173499 485 ntTSL 3 BASIC6.5□□□□□ -1.37
Clp1Q99LI9 Gm21737-201ENSMUST00000178112 664 ntBASIC6.5□□□□□ -1.37
Clp1Q99LI9 Gm21815-201ENSMUST00000178213 664 ntBASIC6.5□□□□□ -1.37
Clp1Q99LI9 Gm20874-201ENSMUST00000178356 663 ntBASIC6.5□□□□□ -1.37
Clp1Q99LI9 Gm21744-201ENSMUST00000178403 662 ntBASIC6.5□□□□□ -1.37
Clp1Q99LI9 Gm21244-201ENSMUST00000178447 684 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Clp1Q99LI9 BC035044-202ENSMUST00000178918 466 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
Clp1Q99LI9 Gm4617-201ENSMUST00000178993 331 ntBASIC6.5□□□□□ -1.37
Clp1Q99LI9 Gm8807-201ENSMUST00000179328 492 ntBASIC6.5□□□□□ -1.37
Clp1Q99LI9 Gm20901-201ENSMUST00000180177 664 ntBASIC6.5□□□□□ -1.37
Clp1Q99LI9 Mir6903-201ENSMUST00000183597 88 ntBASIC6.5□□□□□ -1.37
Clp1Q99LI9 1700028M03Rik-201ENSMUST00000185938 476 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Clp1Q99LI9 Gm21647-201ENSMUST00000189755 664 ntBASIC6.5□□□□□ -1.37
Clp1Q99LI9 Gm10421-203ENSMUST00000190266 781 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Clp1Q99LI9 Gm33206-201ENSMUST00000193544 454 ntTSL 2 BASIC6.5□□□□□ -1.37
Clp1Q99LI9 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Clp1Q99LI9 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC6.5□□□□□ -1.37
Clp1Q99LI9 AC108846.4-201ENSMUST00000216783 341 ntBASIC6.5□□□□□ -1.37
Clp1Q99LI9 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC6.5□□□□□ -1.37
Clp1Q99LI9 Defb13-201ENSMUST00000060587 452 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Clp1Q99LI9 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Clp1Q99LI9 n-R5s69-201ENSMUST00000083872 119 ntBASIC6.5□□□□□ -1.37
Clp1Q99LI9 Olfr1348-201ENSMUST00000086319 957 ntTSL 5 BASIC6.5□□□□□ -1.37
Clp1Q99LI9 Ppp2r3a-201ENSMUST00000066773 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Clp1Q99LI9 Gsdme-202ENSMUST00000101405 4383 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Clp1Q99LI9 Lrriq1-201ENSMUST00000020043 2542 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Clp1Q99LI9 Lrtm1-201ENSMUST00000055662 7321 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Clp1Q99LI9 Magi2-207ENSMUST00000197553 3264 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Clp1Q99LI9 Aadacl3-201ENSMUST00000105749 3153 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Clp1Q99LI9 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Clp1Q99LI9 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Clp1Q99LI9 Trp53bp1-201ENSMUST00000110647 9405 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Clp1Q99LI9 Ddx24-201ENSMUST00000044923 2850 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
Clp1Q99LI9 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Clp1Q99LI9 Gm20356-201ENSMUST00000193390 2477 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Clp1Q99LI9 Sphkap-205ENSMUST00000160953 8154 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Clp1Q99LI9 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Clp1Q99LI9 Dock10-201ENSMUST00000077946 7198 ntAPPRIS P3 TSL 5 BASIC6.49□□□□□ -1.37
Clp1Q99LI9 Vmn2r96-201ENSMUST00000165692 2343 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Clp1Q99LI9 Olfr1080-201ENSMUST00000213185 1582 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
Clp1Q99LI9 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
Clp1Q99LI9 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Clp1Q99LI9 Iigp1-202ENSMUST00000066912 2938 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Clp1Q99LI9 Scn1a-201ENSMUST00000077489 8116 ntAPPRIS P3 TSL 5 BASIC6.49□□□□□ -1.37
Clp1Q99LI9 Tom1l1-204ENSMUST00000107869 1826 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Clp1Q99LI9 AC139941.2-201ENSMUST00000221565 1824 ntBASIC6.49□□□□□ -1.37
Clp1Q99LI9 Oog4-202ENSMUST00000073641 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Clp1Q99LI9 Gm24273-201ENSMUST00000102332 164 ntBASIC6.49□□□□□ -1.37
Clp1Q99LI9 Defa-ps13-201ENSMUST00000120695 204 ntBASIC6.49□□□□□ -1.37
Clp1Q99LI9 Gm13356-201ENSMUST00000121678 335 ntBASIC6.49□□□□□ -1.37
Clp1Q99LI9 Gm14903-201ENSMUST00000122435 537 ntBASIC6.49□□□□□ -1.37
Clp1Q99LI9 Vmn1r239-ps-201ENSMUST00000127465 960 ntBASIC6.49□□□□□ -1.37
Clp1Q99LI9 Gm16086-201ENSMUST00000143652 371 ntTSL 3 BASIC6.49□□□□□ -1.37
Clp1Q99LI9 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC6.49□□□□□ -1.37
Clp1Q99LI9 Mir1970-201ENSMUST00000157839 104 ntBASIC6.49□□□□□ -1.37
Clp1Q99LI9 Pfdn5-208ENSMUST00000170627 330 ntTSL 5 BASIC6.49□□□□□ -1.37
Clp1Q99LI9 Gm20701-201ENSMUST00000176082 347 ntBASIC6.49□□□□□ -1.37
Clp1Q99LI9 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC6.49□□□□□ -1.37
Clp1Q99LI9 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC6.49□□□□□ -1.37
Clp1Q99LI9 Gm21399-201ENSMUST00000180210 597 ntBASIC6.49□□□□□ -1.37
Clp1Q99LI9 Prl3c1-201ENSMUST00000018066 823 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
Clp1Q99LI9 Gm37358-201ENSMUST00000195492 479 ntBASIC6.49□□□□□ -1.37
Clp1Q99LI9 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Clp1Q99LI9 Gm8041-201ENSMUST00000199755 616 ntBASIC6.49□□□□□ -1.37
Clp1Q99LI9 AC134333.1-201ENSMUST00000204536 944 ntBASIC6.49□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms