Protein–RNA interactions for Protein: Q9JM58

Crlf1, Cytokine receptor-like factor 1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf1Q9JM58 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Crlf1Q9JM58 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Crlf1Q9JM58 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Crlf1Q9JM58 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.15□□□□□ -0.14
Crlf1Q9JM58 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.15□□□□□ -0.14
Crlf1Q9JM58 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Crlf1Q9JM58 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Crlf1Q9JM58 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Crlf1Q9JM58 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Crlf1Q9JM58 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Crlf1Q9JM58 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Crlf1Q9JM58 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Crlf1Q9JM58 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Crlf1Q9JM58 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Crlf1Q9JM58 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Crlf1Q9JM58 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC14.14□□□□□ -0.15
Crlf1Q9JM58 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Crlf1Q9JM58 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Crlf1Q9JM58 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC14.14□□□□□ -0.15
Crlf1Q9JM58 Gm27459-201ENSMUST00000184860 107 ntBASIC14.14□□□□□ -0.15
Crlf1Q9JM58 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Crlf1Q9JM58 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Crlf1Q9JM58 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Crlf1Q9JM58 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Crlf1Q9JM58 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.14□□□□□ -0.15
Crlf1Q9JM58 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Crlf1Q9JM58 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Crlf1Q9JM58 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Crlf1Q9JM58 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Crlf1Q9JM58 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Crlf1Q9JM58 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC14.14□□□□□ -0.15
Crlf1Q9JM58 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Crlf1Q9JM58 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Crlf1Q9JM58 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Crlf1Q9JM58 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Crlf1Q9JM58 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Crlf1Q9JM58 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Crlf1Q9JM58 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Crlf1Q9JM58 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Crlf1Q9JM58 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Crlf1Q9JM58 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Crlf1Q9JM58 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC14.13□□□□□ -0.15
Crlf1Q9JM58 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC14.13□□□□□ -0.15
Crlf1Q9JM58 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC14.13□□□□□ -0.15
Crlf1Q9JM58 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Crlf1Q9JM58 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC14.13□□□□□ -0.15
Crlf1Q9JM58 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC14.13□□□□□ -0.15
Crlf1Q9JM58 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.13□□□□□ -0.15
Crlf1Q9JM58 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Crlf1Q9JM58 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Crlf1Q9JM58 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Crlf1Q9JM58 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Crlf1Q9JM58 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Crlf1Q9JM58 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Crlf1Q9JM58 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Crlf1Q9JM58 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Crlf1Q9JM58 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Crlf1Q9JM58 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC14.12□□□□□ -0.15
Crlf1Q9JM58 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Crlf1Q9JM58 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Crlf1Q9JM58 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Crlf1Q9JM58 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC14.12□□□□□ -0.15
Crlf1Q9JM58 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Crlf1Q9JM58 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Crlf1Q9JM58 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Crlf1Q9JM58 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Crlf1Q9JM58 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Crlf1Q9JM58 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Crlf1Q9JM58 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Crlf1Q9JM58 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Crlf1Q9JM58 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Crlf1Q9JM58 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Crlf1Q9JM58 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Crlf1Q9JM58 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Crlf1Q9JM58 Mir770-201ENSMUST00000103252 94 ntBASIC14.11□□□□□ -0.15
Crlf1Q9JM58 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Crlf1Q9JM58 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Crlf1Q9JM58 Gm11860-201ENSMUST00000122346 1010 ntBASIC14.11□□□□□ -0.15
Crlf1Q9JM58 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Crlf1Q9JM58 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Crlf1Q9JM58 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Crlf1Q9JM58 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC14.11□□□□□ -0.15
Crlf1Q9JM58 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Crlf1Q9JM58 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Crlf1Q9JM58 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.11□□□□□ -0.15
Crlf1Q9JM58 Gm43347-201ENSMUST00000200226 580 ntBASIC14.11□□□□□ -0.15
Crlf1Q9JM58 Il3ra-202ENSMUST00000223589 738 ntBASIC14.11□□□□□ -0.15
Crlf1Q9JM58 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Crlf1Q9JM58 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Crlf1Q9JM58 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Crlf1Q9JM58 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Crlf1Q9JM58 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Crlf1Q9JM58 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Crlf1Q9JM58 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Crlf1Q9JM58 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Crlf1Q9JM58 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.1□□□□□ -0.15
Crlf1Q9JM58 Gm18195-201ENSMUST00000207604 706 ntBASIC14.1□□□□□ -0.15
Crlf1Q9JM58 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Crlf1Q9JM58 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Crlf1Q9JM58 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms