Protein–RNA interactions for Protein: Q9D7J9

Echdc3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, mousemouse

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Echdc3Q9D7J9 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Echdc3Q9D7J9 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Echdc3Q9D7J9 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Echdc3Q9D7J9 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Echdc3Q9D7J9 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Echdc3Q9D7J9 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Echdc3Q9D7J9 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Echdc3Q9D7J9 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Echdc3Q9D7J9 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Echdc3Q9D7J9 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.18■□□□□ 0.34
Echdc3Q9D7J9 Gm8495-201ENSMUST00000188740 694 ntBASIC17.18■□□□□ 0.34
Echdc3Q9D7J9 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Echdc3Q9D7J9 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.18■□□□□ 0.34
Echdc3Q9D7J9 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Echdc3Q9D7J9 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Echdc3Q9D7J9 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Echdc3Q9D7J9 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Echdc3Q9D7J9 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Echdc3Q9D7J9 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Echdc3Q9D7J9 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Echdc3Q9D7J9 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Echdc3Q9D7J9 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Echdc3Q9D7J9 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Echdc3Q9D7J9 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Echdc3Q9D7J9 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Echdc3Q9D7J9 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Echdc3Q9D7J9 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.17■□□□□ 0.34
Echdc3Q9D7J9 Gm10849-201ENSMUST00000100397 618 ntBASIC17.17■□□□□ 0.34
Echdc3Q9D7J9 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.17■□□□□ 0.34
Echdc3Q9D7J9 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.17■□□□□ 0.34
Echdc3Q9D7J9 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.17■□□□□ 0.34
Echdc3Q9D7J9 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.17■□□□□ 0.34
Echdc3Q9D7J9 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Echdc3Q9D7J9 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Echdc3Q9D7J9 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Echdc3Q9D7J9 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Echdc3Q9D7J9 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.17■□□□□ 0.34
Echdc3Q9D7J9 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Echdc3Q9D7J9 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Echdc3Q9D7J9 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Echdc3Q9D7J9 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Echdc3Q9D7J9 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Echdc3Q9D7J9 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Echdc3Q9D7J9 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.16■□□□□ 0.34
Echdc3Q9D7J9 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Echdc3Q9D7J9 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Echdc3Q9D7J9 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.16■□□□□ 0.34
Echdc3Q9D7J9 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Echdc3Q9D7J9 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
Echdc3Q9D7J9 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Echdc3Q9D7J9 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Echdc3Q9D7J9 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Echdc3Q9D7J9 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Echdc3Q9D7J9 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Echdc3Q9D7J9 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Echdc3Q9D7J9 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.16■□□□□ 0.34
Echdc3Q9D7J9 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Echdc3Q9D7J9 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Echdc3Q9D7J9 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Echdc3Q9D7J9 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Echdc3Q9D7J9 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Echdc3Q9D7J9 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Echdc3Q9D7J9 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.16■□□□□ 0.34
Echdc3Q9D7J9 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Echdc3Q9D7J9 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Echdc3Q9D7J9 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Echdc3Q9D7J9 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.15■□□□□ 0.34
Echdc3Q9D7J9 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.15■□□□□ 0.34
Echdc3Q9D7J9 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.15■□□□□ 0.34
Echdc3Q9D7J9 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Echdc3Q9D7J9 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Echdc3Q9D7J9 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Echdc3Q9D7J9 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Echdc3Q9D7J9 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Echdc3Q9D7J9 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Echdc3Q9D7J9 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Echdc3Q9D7J9 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Echdc3Q9D7J9 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Echdc3Q9D7J9 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Echdc3Q9D7J9 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Echdc3Q9D7J9 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Echdc3Q9D7J9 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Echdc3Q9D7J9 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
Echdc3Q9D7J9 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Echdc3Q9D7J9 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Echdc3Q9D7J9 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.14■□□□□ 0.33
Echdc3Q9D7J9 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Echdc3Q9D7J9 AV356131-201ENSMUST00000206201 750 ntBASIC17.14■□□□□ 0.33
Echdc3Q9D7J9 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Echdc3Q9D7J9 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Echdc3Q9D7J9 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Echdc3Q9D7J9 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Echdc3Q9D7J9 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Echdc3Q9D7J9 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Echdc3Q9D7J9 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.14■□□□□ 0.33
Echdc3Q9D7J9 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Echdc3Q9D7J9 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Echdc3Q9D7J9 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Echdc3Q9D7J9 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
Echdc3Q9D7J9 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms