Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhga4Q91XY4 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.35■□□□□ 0.37
Pcdhga4Q91XY4 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhga4Q91XY4 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhga4Q91XY4 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhga4Q91XY4 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhga4Q91XY4 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.35■□□□□ 0.37
Pcdhga4Q91XY4 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
Pcdhga4Q91XY4 Gm38285-201ENSMUST00000192928 922 ntBASIC17.35■□□□□ 0.37
Pcdhga4Q91XY4 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhga4Q91XY4 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhga4Q91XY4 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhga4Q91XY4 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhga4Q91XY4 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhga4Q91XY4 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhga4Q91XY4 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhga4Q91XY4 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhga4Q91XY4 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhga4Q91XY4 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhga4Q91XY4 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhga4Q91XY4 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Pcdhga4Q91XY4 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhga4Q91XY4 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Pcdhga4Q91XY4 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhga4Q91XY4 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.34■□□□□ 0.37
Pcdhga4Q91XY4 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhga4Q91XY4 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhga4Q91XY4 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Pcdhga4Q91XY4 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhga4Q91XY4 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.34■□□□□ 0.37
Pcdhga4Q91XY4 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhga4Q91XY4 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhga4Q91XY4 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhga4Q91XY4 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhga4Q91XY4 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhga4Q91XY4 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhga4Q91XY4 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.34■□□□□ 0.37
Pcdhga4Q91XY4 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhga4Q91XY4 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhga4Q91XY4 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.33■□□□□ 0.37
Pcdhga4Q91XY4 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhga4Q91XY4 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhga4Q91XY4 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhga4Q91XY4 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhga4Q91XY4 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.33■□□□□ 0.36
Pcdhga4Q91XY4 Gm15378-201ENSMUST00000121894 207 ntBASIC17.33■□□□□ 0.36
Pcdhga4Q91XY4 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.33■□□□□ 0.36
Pcdhga4Q91XY4 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Pcdhga4Q91XY4 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhga4Q91XY4 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.33■□□□□ 0.36
Pcdhga4Q91XY4 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
Pcdhga4Q91XY4 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhga4Q91XY4 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhga4Q91XY4 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhga4Q91XY4 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhga4Q91XY4 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhga4Q91XY4 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhga4Q91XY4 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhga4Q91XY4 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhga4Q91XY4 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhga4Q91XY4 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.32■□□□□ 0.36
Pcdhga4Q91XY4 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhga4Q91XY4 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhga4Q91XY4 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhga4Q91XY4 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhga4Q91XY4 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Pcdhga4Q91XY4 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhga4Q91XY4 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.32■□□□□ 0.36
Pcdhga4Q91XY4 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhga4Q91XY4 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhga4Q91XY4 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhga4Q91XY4 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhga4Q91XY4 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Pcdhga4Q91XY4 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhga4Q91XY4 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhga4Q91XY4 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhga4Q91XY4 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhga4Q91XY4 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.31■□□□□ 0.36
Pcdhga4Q91XY4 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhga4Q91XY4 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.31■□□□□ 0.36
Pcdhga4Q91XY4 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Pcdhga4Q91XY4 Gm10138-203ENSMUST00000206952 366 ntBASIC17.31■□□□□ 0.36
Pcdhga4Q91XY4 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhga4Q91XY4 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Pcdhga4Q91XY4 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhga4Q91XY4 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.31■□□□□ 0.36
Pcdhga4Q91XY4 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhga4Q91XY4 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhga4Q91XY4 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhga4Q91XY4 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Pcdhga4Q91XY4 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhga4Q91XY4 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhga4Q91XY4 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.31■□□□□ 0.36
Pcdhga4Q91XY4 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Pcdhga4Q91XY4 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Pcdhga4Q91XY4 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhga4Q91XY4 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
Pcdhga4Q91XY4 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhga4Q91XY4 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhga4Q91XY4 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms