Protein–RNA interactions for Protein: Q91XX7

Pcdhgb2, Protocadherin gamma B2, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb2Q91XX7 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Pcdhgb2Q91XX7 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhgb2Q91XX7 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhgb2Q91XX7 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhgb2Q91XX7 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhgb2Q91XX7 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhgb2Q91XX7 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhgb2Q91XX7 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Pcdhgb2Q91XX7 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhgb2Q91XX7 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.61■□□□□ 0.25
Pcdhgb2Q91XX7 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Pcdhgb2Q91XX7 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhgb2Q91XX7 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Pcdhgb2Q91XX7 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhgb2Q91XX7 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhgb2Q91XX7 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.61■□□□□ 0.25
Pcdhgb2Q91XX7 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhgb2Q91XX7 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhgb2Q91XX7 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhgb2Q91XX7 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhgb2Q91XX7 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhgb2Q91XX7 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhgb2Q91XX7 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhgb2Q91XX7 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhgb2Q91XX7 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhgb2Q91XX7 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Pcdhgb2Q91XX7 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
Pcdhgb2Q91XX7 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhgb2Q91XX7 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhgb2Q91XX7 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC16.6■□□□□ 0.25
Pcdhgb2Q91XX7 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Pcdhgb2Q91XX7 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.6■□□□□ 0.25
Pcdhgb2Q91XX7 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhgb2Q91XX7 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhgb2Q91XX7 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Pcdhgb2Q91XX7 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Pcdhgb2Q91XX7 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhgb2Q91XX7 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhgb2Q91XX7 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhgb2Q91XX7 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhgb2Q91XX7 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhgb2Q91XX7 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhgb2Q91XX7 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.6■□□□□ 0.25
Pcdhgb2Q91XX7 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhgb2Q91XX7 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhgb2Q91XX7 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhgb2Q91XX7 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhgb2Q91XX7 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhgb2Q91XX7 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhgb2Q91XX7 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhgb2Q91XX7 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhgb2Q91XX7 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhgb2Q91XX7 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Pcdhgb2Q91XX7 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhgb2Q91XX7 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhgb2Q91XX7 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhgb2Q91XX7 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhgb2Q91XX7 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhgb2Q91XX7 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhgb2Q91XX7 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.59■□□□□ 0.25
Pcdhgb2Q91XX7 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdhgb2Q91XX7 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdhgb2Q91XX7 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.25
Pcdhgb2Q91XX7 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdhgb2Q91XX7 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdhgb2Q91XX7 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Pcdhgb2Q91XX7 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdhgb2Q91XX7 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhgb2Q91XX7 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhgb2Q91XX7 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhgb2Q91XX7 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.58■□□□□ 0.24
Pcdhgb2Q91XX7 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhgb2Q91XX7 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhgb2Q91XX7 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhgb2Q91XX7 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhgb2Q91XX7 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.58■□□□□ 0.24
Pcdhgb2Q91XX7 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.58■□□□□ 0.24
Pcdhgb2Q91XX7 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhgb2Q91XX7 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhgb2Q91XX7 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhgb2Q91XX7 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhgb2Q91XX7 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC16.57■□□□□ 0.24
Pcdhgb2Q91XX7 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC16.57■□□□□ 0.24
Pcdhgb2Q91XX7 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
Pcdhgb2Q91XX7 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Pcdhgb2Q91XX7 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhgb2Q91XX7 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhgb2Q91XX7 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhgb2Q91XX7 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Pcdhgb2Q91XX7 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhgb2Q91XX7 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.56■□□□□ 0.24
Pcdhgb2Q91XX7 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhgb2Q91XX7 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhgb2Q91XX7 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhgb2Q91XX7 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Pcdhgb2Q91XX7 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhgb2Q91XX7 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhgb2Q91XX7 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC16.56■□□□□ 0.24
Pcdhgb2Q91XX7 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhgb2Q91XX7 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms