Protein–RNA interactions for Protein: Q8R3V6

Cuedc1, CUE domain-containing protein 1, mousemouse

Predictions only

Length 388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cuedc1Q8R3V6 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cuedc1Q8R3V6 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cuedc1Q8R3V6 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cuedc1Q8R3V6 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cuedc1Q8R3V6 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Cuedc1Q8R3V6 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
Cuedc1Q8R3V6 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Cuedc1Q8R3V6 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cuedc1Q8R3V6 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16■□□□□ 0.15
Cuedc1Q8R3V6 Gm6627-201ENSMUST00000218299 2386 ntBASIC16■□□□□ 0.15
Cuedc1Q8R3V6 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cuedc1Q8R3V6 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cuedc1Q8R3V6 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Cuedc1Q8R3V6 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16■□□□□ 0.15
Cuedc1Q8R3V6 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16■□□□□ 0.15
Cuedc1Q8R3V6 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cuedc1Q8R3V6 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC16■□□□□ 0.15
Cuedc1Q8R3V6 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cuedc1Q8R3V6 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16■□□□□ 0.15
Cuedc1Q8R3V6 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16■□□□□ 0.15
Cuedc1Q8R3V6 Gm6659-201ENSMUST00000174752 547 ntBASIC16■□□□□ 0.15
Cuedc1Q8R3V6 Gm10459-201ENSMUST00000202708 1155 ntBASIC16■□□□□ 0.15
Cuedc1Q8R3V6 Arhgef4-208ENSMUST00000211073 171 ntBASIC16■□□□□ 0.15
Cuedc1Q8R3V6 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16■□□□□ 0.15
Cuedc1Q8R3V6 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16■□□□□ 0.15
Cuedc1Q8R3V6 Odf3b-204ENSMUST00000227834 930 ntBASIC16■□□□□ 0.15
Cuedc1Q8R3V6 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
Cuedc1Q8R3V6 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cuedc1Q8R3V6 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Cuedc1Q8R3V6 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
Cuedc1Q8R3V6 Gm37812-201ENSMUST00000195216 2475 ntBASIC16■□□□□ 0.15
Cuedc1Q8R3V6 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16■□□□□ 0.15
Cuedc1Q8R3V6 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Cuedc1Q8R3V6 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cuedc1Q8R3V6 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cuedc1Q8R3V6 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cuedc1Q8R3V6 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cuedc1Q8R3V6 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Cuedc1Q8R3V6 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cuedc1Q8R3V6 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cuedc1Q8R3V6 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cuedc1Q8R3V6 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cuedc1Q8R3V6 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC15.99■□□□□ 0.15
Cuedc1Q8R3V6 AC124603.1-201ENSMUST00000223843 308 ntBASIC15.99■□□□□ 0.15
Cuedc1Q8R3V6 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cuedc1Q8R3V6 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cuedc1Q8R3V6 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cuedc1Q8R3V6 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cuedc1Q8R3V6 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cuedc1Q8R3V6 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cuedc1Q8R3V6 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cuedc1Q8R3V6 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cuedc1Q8R3V6 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cuedc1Q8R3V6 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cuedc1Q8R3V6 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cuedc1Q8R3V6 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cuedc1Q8R3V6 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Cuedc1Q8R3V6 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cuedc1Q8R3V6 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cuedc1Q8R3V6 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Cuedc1Q8R3V6 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Cuedc1Q8R3V6 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cuedc1Q8R3V6 Gm13559-201ENSMUST00000120476 863 ntBASIC15.98■□□□□ 0.15
Cuedc1Q8R3V6 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC15.98■□□□□ 0.15
Cuedc1Q8R3V6 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cuedc1Q8R3V6 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cuedc1Q8R3V6 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cuedc1Q8R3V6 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Cuedc1Q8R3V6 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Cuedc1Q8R3V6 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cuedc1Q8R3V6 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Cuedc1Q8R3V6 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Cuedc1Q8R3V6 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cuedc1Q8R3V6 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cuedc1Q8R3V6 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cuedc1Q8R3V6 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Cuedc1Q8R3V6 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cuedc1Q8R3V6 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cuedc1Q8R3V6 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Cuedc1Q8R3V6 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
Cuedc1Q8R3V6 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Cuedc1Q8R3V6 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC15.97■□□□□ 0.15
Cuedc1Q8R3V6 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC15.97■□□□□ 0.15
Cuedc1Q8R3V6 AC156016.1-201ENSMUST00000227190 1035 ntBASIC15.97■□□□□ 0.15
Cuedc1Q8R3V6 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cuedc1Q8R3V6 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC15.97■□□□□ 0.15
Cuedc1Q8R3V6 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cuedc1Q8R3V6 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cuedc1Q8R3V6 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Cuedc1Q8R3V6 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC15.97■□□□□ 0.15
Cuedc1Q8R3V6 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cuedc1Q8R3V6 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Cuedc1Q8R3V6 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cuedc1Q8R3V6 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Cuedc1Q8R3V6 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cuedc1Q8R3V6 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Cuedc1Q8R3V6 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cuedc1Q8R3V6 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Cuedc1Q8R3V6 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC15.96■□□□□ 0.15
Cuedc1Q8R3V6 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms