Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Prpf38aQ4FK66 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Prpf38aQ4FK66 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Prpf38aQ4FK66 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Prpf38aQ4FK66 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Prpf38aQ4FK66 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Prpf38aQ4FK66 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Prpf38aQ4FK66 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Prpf38aQ4FK66 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC20.59■□□□□ 0.89
Prpf38aQ4FK66 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Prpf38aQ4FK66 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC20.59■□□□□ 0.89
Prpf38aQ4FK66 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Prpf38aQ4FK66 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC20.59■□□□□ 0.89
Prpf38aQ4FK66 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Prpf38aQ4FK66 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Prpf38aQ4FK66 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Prpf38aQ4FK66 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Prpf38aQ4FK66 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Prpf38aQ4FK66 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Prpf38aQ4FK66 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Prpf38aQ4FK66 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Prpf38aQ4FK66 Idnk-204ENSMUST00000226010 1898 ntBASIC20.58■□□□□ 0.89
Prpf38aQ4FK66 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
Prpf38aQ4FK66 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Prpf38aQ4FK66 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Prpf38aQ4FK66 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC20.58■□□□□ 0.89
Prpf38aQ4FK66 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Prpf38aQ4FK66 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Prpf38aQ4FK66 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Prpf38aQ4FK66 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Prpf38aQ4FK66 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC20.58■□□□□ 0.89
Prpf38aQ4FK66 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC20.58■□□□□ 0.89
Prpf38aQ4FK66 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC20.58■□□□□ 0.89
Prpf38aQ4FK66 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Prpf38aQ4FK66 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Prpf38aQ4FK66 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Prpf38aQ4FK66 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Prpf38aQ4FK66 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Prpf38aQ4FK66 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.58■□□□□ 0.88
Prpf38aQ4FK66 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Prpf38aQ4FK66 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Prpf38aQ4FK66 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC20.57■□□□□ 0.88
Prpf38aQ4FK66 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Prpf38aQ4FK66 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Prpf38aQ4FK66 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC20.57■□□□□ 0.88
Prpf38aQ4FK66 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Prpf38aQ4FK66 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Prpf38aQ4FK66 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Prpf38aQ4FK66 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Prpf38aQ4FK66 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
Prpf38aQ4FK66 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC20.57■□□□□ 0.88
Prpf38aQ4FK66 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Prpf38aQ4FK66 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Prpf38aQ4FK66 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Prpf38aQ4FK66 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Prpf38aQ4FK66 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Prpf38aQ4FK66 Gm45141-201ENSMUST00000206502 1888 ntBASIC20.56■□□□□ 0.88
Prpf38aQ4FK66 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Prpf38aQ4FK66 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Prpf38aQ4FK66 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Prpf38aQ4FK66 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Prpf38aQ4FK66 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
Prpf38aQ4FK66 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Prpf38aQ4FK66 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Prpf38aQ4FK66 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Prpf38aQ4FK66 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Prpf38aQ4FK66 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Prpf38aQ4FK66 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Prpf38aQ4FK66 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
Prpf38aQ4FK66 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC20.56■□□□□ 0.88
Prpf38aQ4FK66 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Prpf38aQ4FK66 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Prpf38aQ4FK66 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Prpf38aQ4FK66 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Prpf38aQ4FK66 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Prpf38aQ4FK66 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Prpf38aQ4FK66 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Prpf38aQ4FK66 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Prpf38aQ4FK66 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Prpf38aQ4FK66 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Prpf38aQ4FK66 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC20.55■□□□□ 0.88
Prpf38aQ4FK66 Gm7638-201ENSMUST00000121348 967 ntBASIC20.55■□□□□ 0.88
Prpf38aQ4FK66 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC20.55■□□□□ 0.88
Prpf38aQ4FK66 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Prpf38aQ4FK66 Gm18959-201ENSMUST00000208954 655 ntBASIC20.55■□□□□ 0.88
Prpf38aQ4FK66 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC20.55■□□□□ 0.88
Prpf38aQ4FK66 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Prpf38aQ4FK66 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Prpf38aQ4FK66 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Prpf38aQ4FK66 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC20.55■□□□□ 0.88
Prpf38aQ4FK66 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Prpf38aQ4FK66 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Prpf38aQ4FK66 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Prpf38aQ4FK66 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Prpf38aQ4FK66 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
Prpf38aQ4FK66 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Prpf38aQ4FK66 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Prpf38aQ4FK66 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Prpf38aQ4FK66 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Prpf38aQ4FK66 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms