Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.87■□□□□ 0.29
Sox3P53784 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sox3P53784 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Sox3P53784 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Sox3P53784 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sox3P53784 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sox3P53784 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sox3P53784 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sox3P53784 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Sox3P53784 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sox3P53784 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.86■□□□□ 0.29
Sox3P53784 Gm11539-201ENSMUST00000119837 557 ntBASIC16.86■□□□□ 0.29
Sox3P53784 Gm13436-201ENSMUST00000120418 567 ntBASIC16.86■□□□□ 0.29
Sox3P53784 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.86■□□□□ 0.29
Sox3P53784 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Sox3P53784 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sox3P53784 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Sox3P53784 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.86■□□□□ 0.29
Sox3P53784 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Sox3P53784 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Sox3P53784 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sox3P53784 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sox3P53784 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sox3P53784 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sox3P53784 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox3P53784 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox3P53784 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.85■□□□□ 0.29
Sox3P53784 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox3P53784 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox3P53784 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Sox3P53784 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
Sox3P53784 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.85■□□□□ 0.29
Sox3P53784 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox3P53784 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.85■□□□□ 0.29
Sox3P53784 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.85■□□□□ 0.29
Sox3P53784 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Sox3P53784 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox3P53784 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox3P53784 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox3P53784 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Sox3P53784 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox3P53784 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Sox3P53784 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox3P53784 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Sox3P53784 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Sox3P53784 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.85■□□□□ 0.29
Sox3P53784 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
Sox3P53784 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.84■□□□□ 0.29
Sox3P53784 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sox3P53784 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox3P53784 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sox3P53784 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox3P53784 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox3P53784 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sox3P53784 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
Sox3P53784 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox3P53784 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox3P53784 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox3P53784 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sox3P53784 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Sox3P53784 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sox3P53784 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox3P53784 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Sox3P53784 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Sox3P53784 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.83■□□□□ 0.28
Sox3P53784 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Sox3P53784 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Sox3P53784 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Sox3P53784 Gm7889-201ENSMUST00000185591 958 ntBASIC16.83■□□□□ 0.28
Sox3P53784 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.83■□□□□ 0.28
Sox3P53784 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.83■□□□□ 0.28
Sox3P53784 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sox3P53784 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sox3P53784 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Sox3P53784 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sox3P53784 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Sox3P53784 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sox3P53784 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sox3P53784 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Sox3P53784 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox3P53784 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox3P53784 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox3P53784 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sox3P53784 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.82■□□□□ 0.28
Sox3P53784 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox3P53784 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sox3P53784 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.82■□□□□ 0.28
Sox3P53784 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.82■□□□□ 0.28
Sox3P53784 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Sox3P53784 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sox3P53784 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox3P53784 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox3P53784 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox3P53784 Gm43672-201ENSMUST00000199072 1731 ntBASIC16.82■□□□□ 0.28
Sox3P53784 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox3P53784 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox3P53784 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox3P53784 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox3P53784 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Sox3P53784 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms